2JMW,2EBI


Conserved Protein Domain Family
GT1

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cd12203: GT1 
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GT1, myb-like, SANT family
GT-1, a myb-like protein, is one of the GT trihelix transcription factors. GT-1 binds the GT cis-element of rbcS-3A, a light-induced gene, as a dimer. Arabidopsis GT-1 is a trans-activator and acts in the stabilization of components of the transcription pre-initiation complex comprised of TFIIA-TBP-TATA. The isolated GT-1 DNA-binding domain is sufficient to bind DNA. This region closely resembles the myb domain, but with longer helices. It has been proposed that GT-1 may respond to light signals via calcium-dependent phosphorylation to create a light-modulated molecular switch. These proteins are members of the SANT/myb group. SANT is named after 'SWI3, ADA2, N-CoR and TFIIIB', several factors that share this domain. The SANT domain resembles the 3 alpha-helix bundle of the DNA-binding Myb domains and is found in a diverse set of proteins.
Links
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Statistics
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PSSM-Id: 213402
Aligned: 39 rows
Threshold Bit Score: 63.8383
Created: 6-Sep-2012
Updated: 7-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JMW_A     5 ETWVQdETRSLIMFRRGMDGLFn--------tSKSNKHLWEQISSKMREKGFdRSPTMCTDKWRNLLKEFKKAK 70  thale cress
ABK27014  36 PQWGHqETREFIAIRAELEKDFt--------qTKRNKTLWEIIAGKMKSKGYrRSAEQCKCKWKNLVNRYKGKE 101 Sitka spruce
ABR16227  76 VRWTSsDTLVLVNAKLVEKNMHsagg--aikrTKSAIEKWRTISAHCHDNGLdRNATQCRDRWKHILPDYKKIR 147 Sitka spruce
EDQ66993  19 PQWGYhETKEFIAIRAELEKDFt--------qTKRNKALWELIERKMKEKGFrRSADQCNASGKTWSTVTRIGK 84  Physcomitrella patens sub...
EDQ67052  24 AQWGYhETKEFIAIRAELEKDFt--------lTKRNKTLWELIERKMREKGFrRSADQCKCKWKNLVNRYKGKD 89  Physcomitrella patens sub...
EFJ06369  39 PQWGFnETRDLIRIRAELEKDFt--------qTKRNKTLWELIAGKMKDRGYrRSADQCKCKWKNLVNRYKGKE 104 Selaginella moellendorffii
EFJ06571 160 KNWGDdETASLIDFKREDHLGKigamrgseemTLTATNRWKRIAKKMQAAGMqRDWKVCQTRWNNLCNNYKCVY 233 Selaginella moellendorffii
EFJ24372 152 PRWGHtETKDFISIRADMEEDPs---------LSSQKNWWDPIAGKMRERGYaRTSEQCKRKWKKLVSRYKVSE 216 Selaginella moellendorffii
EFN69467   1 YIWSKkETLLLISLYKENEAMFts-------eKTKQHSCWEYIANKMAENGYnISGKKCTKFQTLKRTYKQIKN 67  Camponotus floridanus
AES95530  44 PQWSQqETREFIAIRAELERDFt--------aSKRNKTLWEVVSSKMRERGYrRSPEQCKCKWKNLVNRYKGKE 109 barrel medic
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