Conserved Protein Domain Family
bHLH_TS_TCF23_OUT

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cd19709: bHLH_TS_TCF23_OUT 
basic helix-loop-helix (bHLH) domain found in transcription factor 23 (TCF-23) and similar proteins
TCF-23, also termed Class A basic helix-loop-helix protein 24 (bHLHa24), is a bHLH transcription factor that is essential for progesterone-dependent decidualization. The mouse homolog is also called ovary, uterus and testis protein (OUT), which is expressed predominantly in the reproductive organs such as the uterus, ovary and testis. It shows an Id-like inhibitory activity and functions as a negative regulator of bHLH factors through the formation of a functionally inactive heterodimeric complex. OUT inhibits the formation of TCF3 and MYOD1 homodimers and heterodimers, but lacks DNA binding activity. OUT is involved in the regulation or modulation of smooth muscle contraction of the uterus during pregnancy and particularly around the time of delivery. It also plays a role in the inhibition of myogenesis. Unlike typical bHLH factors, OUT proteins do not bind E-box (CANNTG) or N-box DNA sequences and inhibit DNA binding of homo- and heterodimers consisting of E12 and MyoD in gel mobility shift assays.
Statistics
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PSSM-Id: 381552
Aligned: 6 rows
Threshold Bit Score: 109.802
Created: 28-Jun-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative DNAputative dimer
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:The N-terminal basic region of bHLH mediates high-affinity DNA-binding to specific hexanucleotide sequences
  • Comment:Based on the structure evidence that Mus musculus myoD (1MDY) basic region binds DNA.
  • Citation:PMID 8181063

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #   # ### #    #                 ####                   
Q7RTU1        78 SPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLG 133 human
OCT81498      68 CPENAARERGRVRTLRQAFLSLQAALPSVPPNTKLSKLDVLVLATSYIAHLTHTLD 123 African clawed frog
XP_005998760  77 CPENAARERSRVQTLRRAFLALQAALPSVPPDTKLSKLDVLILATSYIAHLTRTLD 132 coelacanth
XP_007057588  63 CPENAARERSRVRTLRQAFLALQAALPSVPPDTKLSKLDVLVLATSYIAHLTHTLH 118 green sea turtle
KTG33164      60 SPENAARERSRVRNLRQAFHSLQAALPSVPPDTKLSKLDVLVLATNYIAHLTETLD 115 common carp
Q9JLR5        77 SPENAARERTRVKTLRQAFLALQAALPAVPPDTKLSKLDVLVLATSYIAHLTRTLG 132 house mouse

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