Conserved Protein Domain Family
SLC5sbd_SMCT1

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cd11519: SLC5sbd_SMCT1 
Na(+)/monocarboxylate cotransporter SMCT1 and related proteins; solute-binding domain
SMCT1 is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. Human SMCT1 (hSMCT1, also called AIT) is encoded by the tumor suppressor gene SLC5A8. Its expression is under the control of the C/EBP transcription factor. Its tumor-suppressive role is related to uptake of butyrate, propionate, and pyruvate, these latter are inhibitors of histone deacetylases. SMCT1 is expressed in the colon, small intestine, kidney, thyroid gland, retina, and brain. SMCT1 may contribute to the intestinal/colonic and oral absorption of monocarboxylate drugs. SMCT1 also mediates iodide transport from thyrocyte into the colloid lumen in thyroid gland and through transporting l-lactate and ketone bodies helps maintain the energy status and the function of neurons. In the kidney its expression is limited to the S3 segment of the proximal convoluted tubule (in contrast to the low-affinity monocarboxylate transporter SMCT2, belonging to a different family, which is expressed along the entire length of the tubule). In the retina, SMCT1 and SMCT2 may play a differential role in monocarboxylate transport in a cell type-specific manner, SMCT1 is expressed predominantly in retinal neurons and in retinal pigmented epithelial (RPE) cells. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271402
Aligned: 8 rows
Threshold Bit Score: 878.41
Created: 20-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1: putative glycosylation site [posttranslational modification site], 1 residue position
Conserved feature residue pattern:NClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
Q8N695      7 IGTFVVWDYVVFAGMLVISAAIGIYYAFaGGGQQTSKDFLMGGRrMTAVPVALSLTASFMSAVTVLGTPSEVYRFGAIFS 86  human
AAP82286    7 IGSFTVWDYLVFALMLLISAVIGIYYAFaGGGQKTSKDFLMGGRsMTAVPVALSLTASFMSAVTVLGTPAEVYRFGAMFI 86  African clawed frog
XP_522508   7 IGTFVVWDYVVFAGMLVISAAIGIYYAFaGGGQQTSKDFLMGGRrMTAVPVALSLTASFMSAVTVLGTPSEVYRFGAIFS 86  chimpanzee
Q7SYH5      7 IGSFTVWDYLVFALMLLISAVIGIYYAFaGGGQKTSKDFLMGGRsMTAVPVALSLTASFMSAVTVLGTPAEVYRFGAMFI 86  African clawed frog
Q3ZMH1      8 VATFSVWDYVVFAGLILVAAGIGLFQSFrGRKEASSDEFLLGGRqMTAVPVALSLTASFMSGITVIGTPAEAYLYGTPFW 87  zebrafish
CBN80755    8 VATFSVWDYVVFAGTILVSAGIGLFQAIrGRKETSSAEFLLGGRqMTAVPVAMSLTASFMSGITVIGTPAEAYRFGAAFW 87  European seabass
XP_539743   7 IGSFAVWDYVVFAAMLLISAAIGIYYAFaGGGQQTSKDFLMGGRrMTAVPVALSLTASFMSAVTVLGTPSEVYRFGAIFS 86  dog
Q5BL81      7 IGSFTVWDYVVFALMLLISAVIGIYYAFaGGGQKTSKDFLMGGRsMTAVPVALSLTASFMSAVTVLGTPAEVYRFGSMFS 86  western clawed frog
Feature 1                                                                                     
Q8N695     87 IFAFTYFFVVVISAEVFLPVFYKLGITSTYEYLELRFNKCVRLCGTVLFIVQTILYTGIVIYAPALALNQVTGFDLWGAV 166 human
AAP82286   87 IFAFSYTIVVIISSEVFLPVFYRLGITSTYEYLELRFNKFVRLLGTILFIIQTVLYTGIVIYAPALALNQVTGFDLWGAV 166 African clawed frog
XP_522508  87 IFAFTYFFVVVISAEVFLPVFYKLGITSTYEYLELRFNKCVRLCGTVLFIVQTILYTGIVIYAPALALNQVTGFDLWGAV 166 chimpanzee
Q7SYH5     87 IFAFSYTIVVIISSEVFLPVFYRLGITSTYEYLELRFNKFVRLLGTILFIIQTVLYTGIVIYAPALALNQVTGFDLWGAV 166 African clawed frog
Q3ZMH1     88 LFFISYAIMSTISAEIFVPLFYRLNITSTYEYLEMRYNKLIRVIGTSMYIIQTALYTGMVIFAPALALNQITGLDLWGVL 167 zebrafish
CBN80755   88 TFGFAYAIMSAITAEIFVPLFYRLGITSAYEYLEMRFSRPIRLIGTSMYIVQTALYTGLVIYAPALALNQITGLDLWGVL 167 European seabass
XP_539743  87 IFAITYFFVVAISAEVFLPVFYKLGITSTYEYLELRFNKCVRLCGTVLFIVQTILYTGIVIYAPALALNQVTGFDLWGAV 166 dog
Q5BL81     87 IFAFTYAIVVVISSEVFLPVFYRLGITSTYEYLELRFNKFVRLLGTILFIIQTVLYTGIVIYAPALALNQVTGFDLWGAV 166 western clawed frog
Feature 1                                                                                     
Q8N695    167 VATGVVCTFYCTLGGLKAVIWTDVFQVGIMVAGFASVIIQAVVMQGGISTILNDAYDGGRLNFWNFNPNPLQRHTFWTII 246 human
AAP82286  167 VATGVVCTFYCTMGGLKAVVWTDVFQVGIMVAGFTSVIIRAVVVQGGIGPILNDSYYGDRLNFWDFDPNPLKRHTFWTIV 246 African clawed frog
XP_522508 167 VATGVVCTFYCTLGGLKAVIWTDVFQVGIMVAGFASVIIQAVVMQGGISTILNDAYDGGRLNFWNFNPNPLQRHTFWTII 246 chimpanzee
Q7SYH5    167 VATGVVCTFYCTMGGLKAVVWTDVFQVGIMVAGFTSVIIRAVVVQGGIGPILNDSYYGDRLNFWDFDPNPLKRHTFWTIV 246 African clawed frog
Q3ZMH1    168 VATGAVCIIYCTLGGLKAVIWTDVFQMIIMLGGFVAVIARGAVLQGGLGRVWNDSFYGGRLETFSFDPDPLRRHSFWTIV 247 zebrafish
CBN80755  168 VATGVVCIIYCTLGGLKAVIWTDVLQMVIMLAGFVAVIARGAVLQGGLGKIWEDAGQGGRLEAFDFDPDPLKRHTFWSIT 247 European seabass
XP_539743 167 VATGVVCTFYCTLGGLKAVIWTDVFQVGIMVAGFASVIIQATVIQGGISTILNDSYNGGRLNFWNFDPNPLQRHTFWTII 246 dog
Q5BL81    167 VATGVVCTFYCTMGGLKAVVWTDVFQVGIMVAGFSSVIIRAVVVQGGIGPILNDSYYGDRLNFWDFTPNPLQRHSFWTIV 246 western clawed frog
Feature 1                                                                                     
Q8N695    247 IGGTFTWTSIYGVNQSQVQRYISCKSRFQAKLSLYINLVGLWAILTCSVFCGLALYSRYHDCDPWTAKKVSAPDQLMPYL 326 human
AAP82286  247 VGGTFTWTGIYGVNQAQVQRYIACKTRFQAKMSLYVNLVGLWAILACAVLSGLAMYSIYKDCDPWTAKFVSAPDQLMPYL 326 African clawed frog
XP_522508 247 IGGTFTWTSIYGVNQSQVQRYISCKSRFQAKLSLYINLVGLWAILTCSVFCGLALYSRYRDCDPWTAKKVSAPDQLMPYL 326 chimpanzee
Q7SYH5    247 VGGTFTWTGIYGVNQAQVQRYIACKTRFQAKMSLYVNLIGLWAILACAVLSGLAMYSIYKDCDPWTAKFVSAPDQLMPYL 326 African clawed frog
Q3ZMH1    248 VGGSLMWASMYSINQSQVQRYISCRTMTHAKLSLYVNMVGLWVTVSLAMMSGLTMYSIYKDCDPFTNKDVGATDQLLPYL 327 zebrafish
CBN80755  248 IGGSVMWTSIYAINQSQVQRYISCRTLGHAKMSLYVNMVGLWVTVSLAVFSGLTMFSIYKNCDPLTNGDISTPDQLLPYL 327 European seabass
XP_539743 247 IGGTFTWTSIYGVNQSQVQRYISCKSRFQAKMSLYINLLGLWAILICSVLCGLALYSRYHDCDPWTSNKVSAPDQLMPYL 326 dog
Q5BL81    247 VGGTFTWTGIYGVNQSQVQRYIACKTRFQAKLSLYINLLGLWAILACAVLSGLAMYSIYKDCDPWTAQFVSAPDQLMPYL 326 western clawed frog
Feature 1                                                                                     
Q8N695    327 VLDILqDYPGLPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPYfRSLSERsLSWISQGMSVVYGALCIGMAALASLM 406 human
AAP82286  327 ALDILrDYPGLPGLFVSCAYSGTLSTVSSSINALAAVTVEDLIKPYiRSLSEKkMSWISKGTSLLYGAICIGMAGLASLM 406 African clawed frog
XP_522508 327 VLDILqDYPGLPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPYfRSLSERsLSWISQGMSVVYGALCIGMAALASLM 406 chimpanzee
Q7SYH5    327 ALDILrDYPGLPGLFVSCAYSGTLSTVSSSINALAAVTVEDLIKPYiRSLSEKkMSWISKGTSLLYGAICIGMAGIASLM 406 African clawed frog
Q3ZMH1    328 VMDILaDFPGLPGLFVAAAYSGTLSTVSSSINALVAVTVEDFMKPAwPSLTERqLSWINMGMSVFYGAVCIGMAGVASMM 407 zebrafish
CBN80755  328 VMDILaAYPGIPGLFVAAAYSGTLSTVSSSINALVAVTMEDFILPLcKNLTEKqVTWLNMGLSVFFGALCIGMAGIASLM 407 European seabass
XP_539743 327 VLDILqDFPGLPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPHfRSLSERsLSWISQGMSVLFGVLCIGMAALASLM 406 dog
Q5BL81    327 SLDILrDYPGLPGLFVSCAYSGTLSTVSSSINALAAVTVEDLIKPYfRSLSETkMSWISKGTSLIYGAICIAMAGLASLM 406 western clawed frog
Feature 1                                                                               #     
Q8N695    407 GALLQAALSVFGMVGGPLMGLFALGILVPFaNSIGALVGLMAGFAISLWVGIGAQIYPPLPERTLPLHLDIQGCNSTYNe 486 human
AAP82286  407 GGLLQAALSIFGMVGGPLLGLFSLGILFPFvNSLGAVIGLLSGFAISLWVGIGSQIYAPSPSSSLPKPLSLEGCNFTSIe 486 African clawed frog
XP_522508 407 GALLQAALSVFGMVGGPLMGLFALGILVPFaNSIGALVGLMAGFAVSLWVGIGAQIYPPLPERTLPLHLDIQGCNSTYNe 486 chimpanzee
Q7SYH5    407 GGLLQAALSIFGMVGGPLLGLFSLGILFPFvNSLGAVIGLLSGFAISLWVGIGSQIYAPSPSSSLPKPLSLEGCNFTSIe 486 African clawed frog
Q3ZMH1    408 GNILQAALSIFGMISGPLLGLYMLGMFFRCaNSTGGLAGLASGLAITLWVGIGAQLYPPLPEKTLRLPLSVEGCVALNTs 487 zebrafish
CBN80755  408 ESILQAALSIFGMISGPLLGLYLLGMLFRTpNSIGGLVGMIIGLVLTLWVGIGGQIYPPTAEKTNPLPLSTVGCNSTTGq 487 European seabass
XP_539743 407 GALLQAALSIFGMVGGPLLGLFALGILVPFaNSIGALAGLMAGFAISLWVGIGAQLYPPLPERTMPLSLETYGCNNTYNa 486 dog
Q5BL81    407 GGLLQAALSIFGMVGGPLLGLFALGIIFPFvNSLGAVIGLLSGFAISLWVGIGSQIYPPTASSSLPKPLSLEGCNFTSFe 486 western clawed frog
Feature 1                                                                    
Q8N695    487 tnlmtttempfttsvfqiynvqrtpLMDNWYSLSYLYFSTVGTLVTLLVGILVSLSTGGRKQN 549 human
AAP82286  487 snwtstvmpmmttlipetqvssrpeLADSWYSLSYLYFSTIGTIVAVLVGVIVSLLSGGLKQN 549 African clawed frog
XP_522508 487 tnlmtttempfttsvfqiynvqrtpLMDNWYSLSYLYFSTVGTLVTLLVGILVSLSTGGRKQN 549 chimpanzee
Q7SYH5    487 snwtstvmpmmttlipetqvssrpeLADSWYSLSYLYFSTIGTIVAVLVGVIVSLLSGGLKQN 549 African clawed frog
Q3ZMH1    488 etttmtpfstv---lqtttpqprpaLADNWYSLSYLYFSPVGIVVTMIIALIVSAISGGCKQK 547 zebrafish
CBN80755  488 nyttaapwts----pvtlqpdvrppLADSWYSLSYVYFALLGTLTTMVSGLLVSIITGGCKQE 546 European seabass
XP_539743 487 tnwvtttempft-safqvhnaertpLMDNWYSLSYLYFSTVGTLVTMFMGMLISLPTGGRKQN 548 dog
Q5BL81    487 snwtttvmpmm--ttlipevssrpeLADSWYSLSYLYFSTLGTIVAVVVGVIASLLSGGLKQN 547 western clawed frog

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