Conserved Protein Domain Family
CASIMO1_SMIM22

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cd20255: CASIMO1_SMIM22 
small integral membrane protein 22 (SMIM22) of CASIMO1
This family contains the small integral membrane protein 22 (SMIM22) variant of the Cancer-Associated Small Integral Membrane Open reading frame 1 (CASIMO1), a small open reading frame (sORF)-encoded protein (also known as a microprotein). CASIMO1 controls cell proliferation and interacts with squalene epoxidase (SQLE) modulating lipid droplet formation. CASIMO1 RNA is overexpressed predominantly in hormone receptor-positive breast tumors, and its knockdown has been shown to decrease proliferation in multiple breast cancer cell lines. Loss of CASIMO1 disturbs the organization of the actin cytoskeleton, leads to inhibition of cell motility, and stalls the cell cycle in the G0/G1 phase. CASIMO1 interacts with SQLE, a key enzyme in cholesterol synthesis and a known oncogene in breast cancer. This variant is expressed on chromosome 17 in humans, mostly in the colon and stomach.
Statistics
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PSSM-Id: 380777
Aligned: 22 rows
Threshold Bit Score: 57.3357
Created: 4-Apr-2019
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
K7EJ46         3 VSTEELEaTVQEVLGRLKSHQF-FQSTWDTVAFIVFLTFMG-----------------------------TVLLLLLLVv 52  human
XP_004864881   3 LSMEELEvTAQEVLGRLKSRHL-FQSEWDTAAFVVFLTFVG-----------------------------AVLFLLLLVi 52  naked mole-rat
PNI44245       3 VSTEELEaTVQEVLGRLKSHQF-FQSTWDTVAFIVFLTFMG-----------------------------TVLLLLLLVv 52  Pan troglodytes
XP_019660817   6 DLDKELEaTAQEVLGKLRSREL-FQSTWDTAAFIIFLIFLGefglgpwpppppvlvlaedhiwtpvlpagTVLLLLLLVc 84  giant panda
XP_016069934   2 DNLKDLNtTAEEVLGKLKSHQL-FQCKWDIAAFIIFLIFLS-----------------------------TVLFLLLLVw 51  Miniopterus nat...
XP_017501532   7 TLQEEPQtVAQEVLGKLRSRRL-FQSEWDTAAFVVFLLFAG-----------------------------TVLLLLLLAc 56  Malayan pangolin
GCF57727      71 SFGQQVSdQINDALSRLATKEM-FQTDWDIAAFAIFFTFIG-----------------------------AVLALVLLVl 120 Paroedura picta
XP_019660815   6 DLDKELEaTAQEVLGKLRSREL-FQSTWDTAAFIIFLIFLGefglgpwpppppvlvlaedhiwtpvlpagTVLLLLLLVc 84  giant panda
XP_021488060   7 ELKQELEaTAGAVLGKLRSHQL-FQSEWDTGALVVFLTFVG-----------------------------TVVLLLLLVv 56  Mongolian gerbil
NP_001193776   4 SHWNETTtSVYQYLGFQVQKIYpFHDNWNTACFVILLLFIF-----------------------------TVVSLVVLAf 54  human
K7EJ46        53 ----aHCCCCSSPgp-rRESPRKVSPwkvspaglwdlhgtvlgveaegegsggkgahppreqranllgpavllvqerpkg 127 human
XP_004864881  53 ----aHCCCHCCCa---SPRHRKVKRgker-----------------------------------------------lkg 78  naked mole-rat
PNI44245      53 ----aHCCCCSSPgp-rRESPRKVSPwkvspaglrdlhgtvlgveaegegsggkgahppreqranllgptvllmqerpkg 127 Pan troglodytes
XP_019660817  85 ----iHCCCCSCCs---RPASRHQKErpr--------------------------------------------------g 107 giant panda
XP_016069934  52 ----lHCCCCRHPc---SSRSQKASAkqen-----------------------------------------------svg 77  Miniopterus nat...
XP_017501532  57 ----tHCCCCRPRh--gPLLSQKERRg----------------------------------------------------- 77  Malayan pangolin
GCF57727     121 ----iRCCCCCCCdcehPKSYRRAPRkv---------------------------------------------------g 145 Paroedura picta
XP_019660815  85 ----iHCCCCSCCs---RPASRHQKVsleqe---------------------------------------------rprg 112 giant panda
XP_021488060  57 ----vRCCCCCST----SPRPRKEKPkg---------------------------------------------------- 76  Mongolian gerbil
NP_001193776  55 lyevlDCCCCVKNk---TVKDLKSEPn----------------------------------------------------- 78  human
K7EJ46       128 vDNLALEP 135 human
XP_004864881  79 vDNLAMEP 86  naked mole-rat
PNI44245     128 vDNLALEP 135 Pan troglodytes
XP_019660817 108 vDNLALEP 115 giant panda
XP_016069934  78 vSNLTLEP 85  Miniopterus natalensis
XP_017501532  78 vDNLALEP 85  Malayan pangolin
GCF57727     146 iDNRALEP 153 Paroedura picta
XP_019660815 113 vDNLALEP 120 giant panda
XP_021488060  77 vDNLALEP 84  Mongolian gerbil
NP_001193776  79 -PLRSMMD 85  human
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