Conserved Protein Domain Family
HTH_SUN2

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pfam18580: HTH_SUN2 
SUN2 helix-turn-helix domain
LINC complexes are formed by coupling of KASH (Klarsicht, ANC-1, and Syne/Nesprin Homology) and SUN (Sad1 and UNC-84) proteins from the inner and outer nuclear membranes (INM and ONM, respectively). the formation of LINC complexes by KASH and SUN proteins at the nuclear envelope (NE) establishes the physical linkage between the cytoskeleton and nuclear lamina, which is instrumental for the mechanical force transmission from the cytoplasm to the nuclear interior, and is essential for cellular processes such as nuclear positioning and migration, centrosome-nucleus anchorage, and chromosome dynamics. This entry represents an HTH domain found in SUN2 that forms a three-helix bundle to lock the SUN domain in an inactive conformation acting as an inhibitory component.
Statistics
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PSSM-Id: 436594
Aligned: 16 rows
Threshold Bit Score: 77.7571
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_015215222  693 LQGRLASLEQRVFKNITSYTSQTKQMpTAQVVTSAVNGAGVTGITEEQVHAIVNNALRL 751 
XP_016080874  487 LHDQLQKLEHKILAHLAQERGKSAQE-AAAGLGVVLRKEGVTGVTEEQVHHIVSQALKR 544 
XP_015192249  265 LQEELQDLEQKILARLVQGEGQEW---AWHSVDKILESEDITAVTLQDVHAITERALKE 320 
KPP59618      305 LQQALGDLERRLLQKLAEEREKEQPD-MWRSVGETLQREGAGAVTVEDIQQIVHRALRL 362 
XP_003221058  482 LQEHLLALEKKILARISEDQEFSVQN-----VRVALQREGVIGVTQEDVHRIVNQALNR 535 
KYO36317      976 LQDQLQEMEHRILAKISEDQQMSAQD-ARASVRVALQQGGVMAVTEEEVHLIVNRALKR 1033
XP_025038336  499 LQDKLRELEHRILASVSEGQRLSARD-AKASIGVALQQEGVTGVTEEQVHVIVNRALQR 556 
XP_015144116  464 LQAELRALELRILAQMREERGLAARD----SIGVALRQGGAGGVTEEQVHLIVDQALKR 518 
KFO81720      463 LQTELQSLEQKILAKVLEDQALLVQD-VQAGTGVAVRE----GVTEEQVHHIVSQALQR 516 
KFM02169      448 LQAELQALERKILAKVLEDRRLSARD-AQAGIGVALRQGGTTGVTEEQVHLIVGQALKR 505 
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