Conserved Protein Domain Family
PDZ_3

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pfam17815: PDZ_3 
PDZ domain
This entry contains the second PDZ domain from plant peptidases such as Deg2. This domain is involved in cage assembly.
Statistics
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PSSM-Id: 436064
Aligned: 33 rows
Threshold Bit Score: 137.317
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001633828   296 VPTQLYDKRPSYLVYAGLVFVALSQPYMQHQy-GKDWARKAPIRLCDRALYGILEN-----------PDQEVILLSQVLA 363
EIJ35545       404 VKPNQYDKQPSYFIYGGFVFMPLNQDVIDA-------MDGLPARIG-ALTYESPDE-----------NRSEAVIMTKVLP 464
jgi:Sterm_1578 338 IKNSSFEEPPTYFIYGGLIFEPLTDIYINN----------SPIKLPEDVDSIQGLQ-----------NKTELVVLVRVLS 396
EEY35941       338 VKNVTLETAPSYLVYGGLLFEPLTNNYMGV-----T-----QGALNSVYEKEESFK-----------DYSELAVLVRVLP 396
WP_014958260   348 VPYRQYETEPRFYIIGGLVFEVLSLNYLYEYggANNFYLNAPTELLNLFYNEEQRQ-----------DRKEVVLLVQVLA 416 Desulfobacula...
WP_013942997   337 VGEIQYNKRPTYYTVGGLVFQPLTVNYLIH----AFEQDSPALNFLYYLKHGKISE-----------DRSQVVVLTRVLP 401 Simkania nege...
ELR17558       366 VPTPTYDVPPSYFLYCGLLFQPLSKDYLTTW---SNWRKNAPKEYVHFYECGIPEK-----------DRTQVVVLTKILA 431
jgi:Hoch_6690  314 VPRTEYDRDPDYFVYGGLVFQTLTRELLRTW---DKWFNKAPKEFLHAYYMGHRTA-----------ERQQLIVLTQVLS 379
KNC50186       368 VPKQQYDIKPVYFIYGGLVFQPLTRGLLETW---DDWRETAPKDLLYHYKCGVRTP-----------ELEELVVFSGILS 433
XP_005760844   358 PRNHGFDCFPHYVIIGGLVFVRLCCPMLED-----KRSKGHHSAIYDLVNYQIARSfppadgggeggEVAEILLLTEILA 432
XP_001633828   364 SELTTGYEN---IANLQ---------------------LFKVNGTPVLNLKHLAKVLveithpfettgdptvithagrnp 419
EIJ35545       465 ADINKDYHH---DSNLL---------------------IEKINGENIRNFAEFFQKI----------------------- 497
jgi:Sterm_1578 397 DDVNIGYNN---YYDAI---------------------ITRVNGESYTDFRDFVRIV----------------------- 429
EEY35941       397 FDVNLGYSD---MGNLI---------------------ITKVNGQKYKDFKDFVKKV----------------------- 429
WP_014958260   417 DEVNVGYHE---FINGI---------------------ISKVNGKKINVMEDLVSAF----------------------- 449 Desulfobacula...
WP_013942997   402 DSVNVGYQK---IVDEV---------------------VSSVNGVKIRNIRDLINAF----------------------- 434 Simkania nege...
ELR17558       432 DRINVGYDDdgaYTNSS---------------------VTSCNGVPIRNLQHLVD------------------------- 465
jgi:Hoch_6690  380 DEINIGYDR---FYNES---------------------VMAVNGVMPRDMAEFVRML----------------------- 412
KNC50186       434 DSINYGYDD---YEHAI---------------------ISSVNGVKVASVRDFVTKL----------------------- 466
XP_005760844   433 APLNYGR-----VCHARdgprgggeevgrrytchawrvLDTLNGQRPKSLRALHQMY----------------------- 484
XP_001633828   420 ssvetrqatrtdiasgsegvvsnrqnytsfasiedevrdvtkseasvmcesrtmsfegegtenratsradhqrdiersap 499
EIJ35545           --------------------------------------------------------------------------------    
jgi:Sterm_1578     --------------------------------------------------------------------------------    
EEY35941           --------------------------------------------------------------------------------    
WP_014958260       --------------------------------------------------------------------------------     Desulfobacula...
WP_013942997       --------------------------------------------------------------------------------     Simkania nege...
ELR17558           --------------------------------------------------------------------------------    
jgi:Hoch_6690      --------------------------------------------------------------------------------    
KNC50186           --------------------------------------------------------------------------------    
XP_005760844       --------------------------------------------------------------------------------    
XP_001633828   500 ssfgsnsktslnstfsgldedptLISRE---DYVHFELDK-DKIIVL---HIPSAAKHSPEILRQYAIGQPCSDD 567
EIJ35545       498 -----------------------QSASS---DFITLETAD-DYQIVI---ERKEALANQPNILSRYGITSDRSKD 542
jgi:Sterm_1578 430 -----------------------KTSDE---QFMKFEDID-GNEIVL---DTRQVEKRNPEIFQNYSIDREMSAD 474
EEY35941       430 -----------------------QAVNS---EFIVFETDR-GEEIVL---DVKQVQAEKAELMRNYNITSDMSDD 474
WP_014958260   450 -----------------------ETWNG---DYHVIEDIK-GFKIIL---NSHAVKEADNRILKKYKIFSDRSAG 494 Desulfobacula tolu...
WP_013942997   435 -----------------------EKSTG---PYIHLALET-DGEIVL---DRDHVLERNTKILSNYLIPNDRSED 479 Simkania negevensis
ELR17558       466 -------------------------------EIITLVTSE-NGVVVLpapKHKTAEEAKERILRVYKIQQDRSAD 508
jgi:Hoch_6690  413 -----------------------D-EAT---GVVEIRSSG-PGVMLF---DSEQVEAANARILARYHITRDRSLH 456
KNC50186       467 -----------------------ETAIAggsSTISIRTDN-DIILFF---DVDEVAAKQPAILDRYKVPFDRSIH 514
XP_005760844   485 -----------------------RAVPDg--AFLEFVFSHgGDQIVL---DATECRQSEPDILQLHAIPSATSDG 531
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