Conserved Protein Domain Family
NHP6B

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COG5648: NHP6B 
Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
Statistics
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PSSM-Id: 227935
Aligned: 9 rows
Threshold Bit Score: 169.273
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
547746   291 MQQQLQLQQQQQLQQQQQLQQQHQLQQQQQLQQQHHHLQQQQQQQQHPVVKKLSSTQS-RIERRKQLKKQGPKRPSSAYF 369 baker's yeast
19074377   1 ---------------------------MSGPCLLLNFYKPFLYPLITMVTEKSKKPRS-KTAVKRRKDPNAPKKPMSGYF 52  Encephalitozoon cun...
1723428    1 MRLFDAMPPYLTYQAPLSLIIFHKMVFAIRIRQFHTTLVSAEKNGLQKLIPPRLKTIWnQMLVETKGAGNGPERFEMIRQ 80  fission yeast
19114226   1 --------------------------------------------------MPRAAK------SSRKKDPNTPKRNMSAFM 24  fission yeast
6319565    1 ------------------------------------------MAATKEAKQPKEPKK---RTTRRKKDPNAPKRRLSAYM 35  baker's yeast
2495255   24 IQRSRLSVKRLKLEYGVLLERLESRIELDPELNCEDPLPTLASFKQELLTKPFRKSKT-KRHKVKERDPNMPKRPTNAYL 102 baker's yeast
6320379   36 DFYNAIGDDEEEKIEAFTTLTESLQTLTSGVNHLHGISSELVNPIDDDKDAIIAAPVK-AVRRKIERDPNAPKKPLTVFF 114 baker's yeast
398988     1 ---------------------------MNSYSLLTRSFHESSKPLFNLASTLLKASK--RTQLRNELIKQGPKRPTSAYF 51  baker's yeast
128182     1 ------------------------------------------------MVTPREPKK---RTTRKKKDPNAPKRALSAYM 29  baker's yeast
547746   370 LFSMSIRNELLQQFPEA-----KVPELSKLASARWKELT----DDQKKPFYEEFRTNWEKYRVVRDAYEKTLPPKRPSGP 440 baker's yeast
19074377  53 IFGQEQRKKNEELSR-L-----PVADQGRAISEMWKKLS----DEEREEYNKISNRERELYQARIEEYKKSDEYHNHLEK 122 Encephalitozoon cun...
1723428   81 KYKALTADEIQKYKNKLq---eQFDAEKKRFMETLRSFTpteiDSENRRRSKEAHSTGSRYYRLRHPDVPKKPSSAFILF 157 fission yeast
19114226  25 FFSIENREKMKTDNPDA-----TFGQLGSLLGKRWKELT----STEREPYEEKARQDKERYERERKEYDTKLANGEKTGK 95  fission yeast
6319565   36 FFANENRDIVRSENPDV-----TFGQVGRILGERWKALT----AEEKQPYESKAQADKKRYESEKELYNATRA------- 99  baker's yeast
2495255  103 LYCEMNKERIRQNGS---------LDVTRDLAEGWKNLN----EQDRKPYYKLYSEDRERYQMEMEIYNKKISNIDADDD 169 baker's yeast
6320379  115 AYSAYVRQELREDRQKAglpplSSTEITQEISKKWKELS----DNEKEKWKQAYNVELENYQREKSKYLEAKKNGTLPPA 190 baker's yeast
398988    52 LYLQDHRSQFVKENPTL-----RPAEISKIAGEKWQNLE----ADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGP 122 baker's yeast
128182    30 FFANENRDIVRSENPDI-----TFGQVGKKLGEKWKALT----PEEKQPYEAKAQADKKRYESEKELYNATLA------- 93  baker's yeast
547746   441 FIQF--TQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEYTETYKKRLKEWESCYPDE 501 baker's yeast
19074377 123 VAAD--EAAAGKKKKGIKKVTGYNEFFKAVRKAVSEENPSFTMMETTSAVAKRWKELSEDEKA 183 Encephalitozoon cuniculi
1723428  158 YKELrnNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKEQYDKFMKEA 220 fission yeast
19114226  96 ASAP--AAAAAAKEE------------------------------------------------ 108 fission yeast
6319565      ---------------------------------------------------------------     baker's yeast
2495255  170 KEEN--EQKIKNNEEGSSTKVADSKGGEDGSLVSSN--------------------------- 203 baker's yeast
6320379  191 SLEN--GPTHAPVPIPFSLQHAAEPPVEKRPHDDDGSSEKKKKKKKKDKKKDKSNSSI----- 246 baker's yeast
398988   123 FIKY--ANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYNARYPLN 183 baker's yeast
128182       ---------------------------------------------------------------     baker's yeast
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