2D7I,2FFU,3C9Z,2ZQO,1YBI,2VSA,1QXM


Conserved Protein Domain Family
RICIN

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smart00458: RICIN 
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Ricin-type beta-trefoil
Carbohydrate-binding domain formed from presumed gene triplication.
Statistics
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PSSM-Id: 214672
Aligned: 70 rows
Threshold Bit Score: 39.4168
Created: 13-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2D7I_A   430 IRNvGTGLCADTKHGa--lG----SPLRLEGC-VRgrgeaawNNMQVFTFTWREDIRPg-dPQhtkkFCFDAIS-HT--S 498 human
AAB39475 312 IVG-RDGLCVDVRNG----YdtdgTPLQLWPC-GT-------QRNQRWTFDSDDTIRS---MG----KCMTANG-LNngS 370 European elder
AAC49989 325 ISG-WDGLCVDVRDG----HyidgNTVQLGPC-GN-------ECNQLWTFRTDGTIRW---LG----KCLTTSS------ 378 European elder
AAC49989 447 FIVgYKQMCLTENGE----N----NFVWLEDC-VLn------RVEQEWALYGDGTIRVnsnRS----LCVTSED-HEpsD 506 European elder
AAC49754 443 FIVgYEQMCLETNPG----N----NDVSLGDC-SVks---asKVDQKWALYGDGTIRVnndRS----LCVTSEG-KSsnE 505 European elder
AAC15885 197 LIVgYNEMCLQSNGE----N----NGVWMEDC-EAt------SLQQQWALFGDRTIRVnsdRG----LCVTTNG-YNskD 256 European elder
AAA32624 409 SISgYSDLCMQAQGS----N------VWMADC-DSn------KKEQQWALYTDGSIRSvqnTN----NCLTSKD-HKqgS 466 Indian licorice
AAA32624 278 RIGgRDGMCVDVYDN----GyhngNRIIMWKCkDRl------EENQLWTLKSDKTIRS---NG----KCLTTYG-YApgS 339 Indian licorice
AAB22584 290 RIVgRNGLCVDVTGE----EffdgNPIQLWPC-KSn-----tDWNQLWTLRKDSTIRS---NG----KCLTISK-SSprQ 351 castor bean
3C9Z_A     6 NIVgRDGLCVDVRNGydtdG----TPLQLWPC--Gt------QRNQRWTFDSDDTIRSm---G----KCMTANGlNNg-S 65  European elder
2D7I_A   499 PVTLYDCHSm-K-GN-QLWKYRKDKTLYHPVSGSCMDCSESD-H---RIFMNTCN-PS-SlTQQWLFE 557 human
AAB39475 371 NIVIFNCSTaaE-NA-IKWEVPIDGSIINPSSGLVMTAPRAA-Sr--TILLLEDN-IYaA-SQGWTVT 431 European elder
AAC49989 379 SVMIYDCNTvpP-EA-TKWVVSTDGTITNPRSGLVLTAPQAA-Eg--TALSLENN-IHaA-RQGWTVG 439 European elder
AAC49989 507 LIVILKCEG--S-GN-QRWVFNTNGTISNPNAKLVMDVAQSN-VslrKIILYPPT-GN-P-NQQWITT 566 European elder
AAC49754 506 PIIILKCLG--W-AN-QRWVFNTDGTISNPDSKLVMHVDQND-VplrKIILSHPS-GT-S-NQQWIAS 565 European elder
AAC15885 257 LIIILQCQG--L-PS-QRWFFNSNGAIVNPNSTLVMDVKESD-VslrEIIIFPYH-GD-P-NQQWVTQ 316 European elder
AAA32624 467 TILLMGCSNg-W-AS-QRWVFKNDGSIYSLYDDMVMDVKGSD-PslkQIILWPYT-GK-P-NQIWLTl 527 Indian licorice
AAA32624 340 YVMIYDCTSavA-EA-TYWEIWDNGTIINPKSALVLSAESSSmGg--TLTVQTNE-YL-M-RQGWRTg 400 Indian licorice
AAB22584 352 QVVIYNCSTa-TvGA-TRWQIWDNRTIINPRSGLVLAATSGN-Sg-tKLTVQTNI-YA-V-SQGWLPT 412 castor bean
3C9Z_A    66 NIVIFNCSTa-A-ENaIKWEVPIDGSIINPSSGLVMTAPRAA-Sr--TILLLEDNiYA-A-SQGWTVT 126 European elder
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