2PMZ,3H0G


Conserved Protein Domain Family
RNA_pol_Rpb2_4

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pfam04566: RNA_pol_Rpb2_4 
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RNA polymerase Rpb2, domain 4
RNA polymerases catalyze the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Domain 4, is also known as the external 2 domain.
Statistics
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PSSM-Id: 428012
Aligned: 244 rows
Threshold Bit Score: 48.1314
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2PMZ_B                    520 VILNGRLIGY-YQDG--GELANKIRERRR---KGE-ISDEVNVGHIVTdfINE---VHVNCDSGRVRRPLIIVS 583  Sacchar...
Q22C56                     12 IYLFGKLLFL-TNDP--YSTIQYLRQGRF---QGK-IPRYVTFEVQGQ--WNE---ILIYGDSGRMIRPLFVIE 73   Tetrahy...
EXX52525                  571 VFVNGNLSCI-TDEP--LDLIRLIRDNKG-----NsLPADIGIVNDVH--VNE---IRFYCDSGRMCRPLFVVN 631 
Q0E549                    568 VLVNGTPVGY-VSEP--NLALNILRRLRN----LRcLNDDVSISHDTV--TDT---IEVWCDAGRFVRPLLYCR 629  Spodopt...
1_pfamImport                1 VFVNGDWLGC-VQDF--ASFLMRYRLKRR---EGE-INMFTTVSHNII--ANE---IRLWVDSWRLIRPLLIVR 62  
EOB12651                  512 VFLDGRLLGH-TESP--DLLIEKLREYRR---KNN---SRFEVVFNNQ--DKQfgiLSVHNGIGRFTRPVFHKS 574 
Q7T6X7                    568 VFLNGNWLGV-TRNI--IKIHNDLRAMRF---RGE-LSRMVGLVLNYK--TAE---FHIYTDGGRLIRPYLTVT 629  Acantha...
Q91F97                    600 IFVNGGICGL-TSKP--QQLLSDVRDLKL----KHcLKYDVSAVFIPE--LKE---VHISSDAGRFIRPVLNLQ 661  Inverte...
WGS:AAFB:cds.EHI_022940A  560 VFLNGVWLKC-SEQP--QKLLEELKNYRKnstKGK-VKKVMSMVLDQL--HKE---LRIYTDAGRCTRPLFTVS 624 
Q4A245                    554 LHVNGTIVGYaITIDqiKEIATQMRSLRR---HGN-LPFDCSISISN---DNS---LFVNSDHGALLRPLIIRD 617  Emilian...
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