Conserved Protein Domain Family
SEC21

?
COG5240: SEC21 
Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
Statistics
?
PSSM-Id: 227565
Aligned: 3 rows
Threshold Bit Score: 1105.06
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1706001    1 MSAHTYKKFENSTSGDLPDKMTIYQDCMNTFNESPVNSKRCRLLISRLLRLLAQGETFPQNEATALFFSISKLFQHQNDP 80   baker's yeast
19172987   1 ---------MKTKVFTTLTERQLLEEMNESLTKSPVSTRSAVKALNNLFYMLSTRKLS-EATVRNVYVALLKGFQSKDLY 70   Encephalitozoon cu...
3182972    1 MSYSKKDDDGDESIFANVNQVTVTQDAR-AFNSSSISPRKSRRLLSKIAYLIYTGEHFQEKQATELFFGITKLFQHKDPS 79   fission yeast
1706001   81 LRQAVYLAIKELSGISEDVLMATSSIMKDVQNGSD-LIKPDAIRSLTYVLDESTAFSAERLLKSAVVSRHPSISSAALCT 159  baker's yeast
19172987  71 LKLCIYSAIEKMSKLTDEGLVGINILMNDLNGKVPdDVKAMALRTLFSIIPGEMVYDFGKYVNQAFISTSMARRDMSVVV 150  Encephalitozoon cu...
3182972   80 LRQFVYIIIKELSVVAEDVIMITSSIMKDTATGREtIYRPNAIRSLIRVIDANTVPAIERILTTGIVDPISAVASAALVS 159  fission yeast
1706001  160 SYHLLPISEVTIRRFTNETQEAVLD------LKQFPNQHGNSEYYPNSTYISQYHALGLLYQLKKTDKMALLKLVRHFSE 233  baker's yeast
19172987 151 AYKLLCNNFNQTKKWL-------------------------EGIEPTGNPLMDYHVVGFLAQSKR----LQLSSVEHFRG 201  Encephalitozoon cu...
3182972  160 AYHLYPVAKDIVSRWNNEVQDAVTShnvgrkVASSPFFTSTLGYTPNASGISQYHALGLLYRIRRHDSIAMNKLLQLLVS 239  fission yeast
1706001  234 NN-SMKNQLAKVELVKIVNDLIYRDPQLFSQFRPLLSDWLSNKFESVQLETAKLITSFATRNsrlVAPELYAAAISALQS 312  baker's yeast
19172987 202 PA--------GILGVRATVEALKENSDALLILRKFLNSKYSD--EMVFMEAARAVCALSEEY----GSQFVDQTVQSLRT 267  Encephalitozoon cu...
3182972  240 NLgTVSNSHAFVMLIRYISSLMDQNTQFRDQMVPFLHGWLKSKGDMVNLEVARNMVR--LKN---ISDDDLQPVVSVLKI 314  fission yeast
1706001  313 LLTVPRVSSRFAALRILNRISMVSPEKIVVCNPELESLINDSNRNISTYAITTLLKTGTSKNISSLISTITNFIHDVSDD 392  baker's yeast
19172987 268 FLKSTNVVLQFSAMRIISQLAQKYPQKVSVANKEVEDLVSSENKTISMFAITSLLKTGTEETIDRLVNLIPSMVHDMSDG 347  Encephalitozoon cu...
3182972  315 FLSSHRSATRFSAIRTLNELAMTRPHLVHSCNLNIESLITDVNRSIATYAITTLLKTGNDESVDRLMKQIVTFMSDISDN 394  fission yeast
1706001  393 FKIIIIDAVRTLSLNFPQEWKSILNFLIDVLKNsEGGFKFKNSIVEALIDIVSFVPQSKELALENLCDFIEDCEFNEILV 472  baker's yeast
19172987 348 FKKVAIETLESLSNLFESKKLLYIDFLGSSLLQ-KGELEFKKYMIDVISRAMEND-DMRERILEVLCTYIEDSQYHQITL 425  Encephalitozoon cu...
3182972  395 FKIIVVDAIRSLCLKFPRKQDSMLTFLSNILCD-EGGYEFKRAAVDAISDMIKYIPESKERALAELCEFIEDCEYPKIAV 473  fission yeast
1706001  473 RILHLLGKEGPSAPNPSLYVRHIYNRVVLENSIIRSAAVVALSKFALTKNDPTLYESIISLLKRIANDKDDEVRDRATIA 552  baker's yeast
19172987 426 DILGILGREIPRSKTPGKYVVHVLNRLILENNHVRAGALQCL----YNISSVVSPQTVENAMKRCLNDQDESIRETASFL 501  Encephalitozoon cu...
3182972  474 RILSILGEEGPKASEPTRFIRYIYNRIMLENAIVRSAAVSALTKFGLNAEDKFVQRSVKVILTRCLEDADDEVRDRAAFS 553  fission yeast
1706001  553 LEFIDsarNKDDVIAqnLIESKYFYDIPSLESKLSSYISSntDSFATAFDVNQVRKFTEDEMKAINLKRKqeqifnqKSE 632  baker's yeast
19172987 502 LRNMR---LSRACEP---FSFDELGDIKSGVLERIGKVDE---------------------------------------- 535  Encephalitozoon cu...
3182972  554 VKALE---DRDAFLP--VVKSDKIPSLPALERSLVIYISE--RKFGQGFDIKSVPVLSQEEIDAENLRIK-------KAT 619  fission yeast
1706001  633 TTLDTTpeaESVPEKraDANSFAGPNLDdhqedllaTKYADELLSIEQIKPFGQLVNSS-RAISLTEPEAEFVVRGVKHL 711  baker's yeast
19172987 536 ------------DKE-----SKMDPLIK-----------------------------SC-RELILTEPSADVQIKVTKNV 568  Encephalitozoon cu...
3182972  620 TEVEFT---EVTPAE--DQNALASSNIE--------TEFLNALESVSEFNEYGPVLKSSpSPIELTEQETEFVVKVVKHV 686  fission yeast
1706001  712 FKDNVVLQFNITNTLTDIALDNVSVVCTPEISDEAElEELFTLQVDRllpSEEAACYVAFKKLDEIVMEG--FLNNLTFT 789  baker's yeast
19172987 569 YEDRLVLVFLLENKLEGIQISDGILGLVGTGGVKKS-MSIKVDQIDS----LGTLSIER----EWDIEEGy-VVNGAFDY 638  Encephalitozoon cu...
3182972  687 FKDHLVVQFQLHNTLSEVILENAVVVSTPSTDDLVE-ECVVPAAIVS---GEPVSIFVSFKFNDSVPYPLttLTNTLQFT 762  fission yeast
1706001  790 TKEINPDTNEPFdgDEGFQDEYEIDSIFLNAGDYVKSSFTGNFSATFDELPCEEVAVFNIQEDLSIQEVVDKIILNSSCL 869  baker's yeast
19172987 639 TVCVEGDISDTE---T---DSISLEPFQITTLDFVRPVRIKQTP----RNKREITFNLQGDIYAAGKKILD--LLN-MKI 705  Encephalitozoon cu...
3182972  763 TKEIDIHTGEPE--EEGYEDEYKIDDLDVSAGDFISPAYESNFDGLFDSLEHEASEVYVLSLLDSFRSTCSRVAELLQMQ 840  fission yeast
1706001  870 PVESTQFaPSDSNSHTLKLFGKsALTGSKVALQIKMIKS--SKGLALKVHGKGEdSLLCSDLVNGLMQ 935  baker's yeast
19172987 706 VTQETET--N---TMVMTLNGE--YHGTPISIRVNMVYSm-ACRCTVGVYCDNE---YVTQKIVRLFD 762  Encephalitozoon cuniculi
3182972  841 PLEGTEN-PTDKPVHVMKLSGK-LVNGEKVLALVKMAHSkdGEGITIKVIARGE-SDSSVELVVGGIA 905  fission yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap