Conserved Protein Domain Family
OpituPEPCTERM_1

?
TIGR04254: OpituPEPCTERM_1 
putative globular PEP-CTERM protein
Representatives of this family include a 13-member paralogous family of proteins about 215 amino acids in length from the termite gut bacterium Opitutaceae bacterium TAV2, a member of the Verrucomicrobia. The signal peptide (N-terminal) and PEP-CTERM putative protein sorting signal (C-terminal) are not included in the seed alignment. Conserved residues such as an invariant Arg and a lack of conspicuous low-complexity sequence suggest a globular structure and possible enzymatic activity. Members average about thirty percent sequence identify overall, but over seventy percent in the PEP-CTERM region. The function of this family is unknown.
Statistics
?
PSSM-Id: 275081
Aligned: 10 rows
Threshold Bit Score: 114.053
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ZP_03723490  40 DLATSADGYLVSFWVEDTVKGLV--CAGVNTFVDLYy-------------dMPEYAGYYEYNSAIPGTQEnlff-ntpDN 103 Diplosphaera col...
ZP_03725296  49 DYVMGADGYIVTVWLSNNNQGDYa-LVGAGELSDTW---------------PSDSYGLYAVPTNLGSVWLd-------SS 105 Diplosphaera col...
ZP_03725426  46 SPFYGSDGYIAAVFVDTANQGNNv-LIGVGDFCDTWgg------------syTSMTGMFAAVTWENSIWLn-------PS 105 Diplosphaera col...
ZP_03724092  51 NGLSGYDNYVIGLWYQTYGTTDQwtFLGGGLFEDRIypeygieagyvestpGGGIPVYTQSSWTLEGGWL--------TG 122 Diplosphaera col...
ZP_03726362  42 GIITSDTGYVATLWWGDTASSSLs-FVQAGIFDSN------------------------GWWWGLDEALLtgki-yaeKG 95  Diplosphaera col...
ZP_03725827  44 PRASAALGYVATFWYGASDPGTLt-CYGASTFLDAAdi-----------lpGEGLEGFFQWDTSERTGELvngnvpiaPT 111 Diplosphaera col...
ZP_03724939  40 APVSGNDGYIITFWYGASDTGPLtlAECAAGFLDADy--------------GSEYIGLFNTQMFLTQGLT--------RN 97  Diplosphaera col...
ZP_03726158  45 SLLSAYDGYIVTFWYGSSAGSTLtiAHSAMNIADSEf--------------GEETKGLFNTAAFYVDGLT--------KG 102 Diplosphaera col...
ZP_03725402  35 DGALATNGYIATHW-GGTGPNDLt-LLGVSAMLDAY---------------GPEYAG-QGWYDFQAEIESe-------RN 89  Diplosphaera col...
ZP_03727594  36 PGALAHNGYIATHWFG-TDASDLr-MVSASAMVDAYnd-----------lySDTFDGL-GWIDSVAVVTAn-------TS 94  Diplosphaera col...
ZP_03723490 104 GLLYTEIRVWQYfTdGQV--HTQTDYDLISATSl--------nAIEGIW--NAAVAA-GVSHGTVGGTVATNGNG--TpV 168 Diplosphaera col...
ZP_03725296 106 EIFDVHIRVFKY-G-NES--LDYDQVHDLYDNG----------SVAGRWq-TLISGSdEFTYGEYTYQQQAGATG--R-I 167 Diplosphaera col...
ZP_03725426 106 ETFTIYIRVFQL-ApGVN--ADFDYAQDAYLDG----------RVAAKWadILLNGG---TYGEYSYQETATAVG--E-V 166 Diplosphaera col...
ZP_03724092 123 DTITFMARAWQYpGdATV--ATITSLQQLE---------------DSFY--NLVTGS-KYAEVTWQSVDVDPDFG--T-N 179 Diplosphaera col...
ZP_03726362  96 ATIYTEVRIFQY-TpGEL--ITLETVSGIGAEE-----------WDRYW--NLIQGT-EVSQALIYGTAKLGTGG--TtV 156 Diplosphaera col...
ZP_03725827 112 TSYDFEVRIFKY-NdGP---LTQAYVDGLSIAY-----------WADQW--DLVAGT-SVEQGILYGSMTSTPSG--AfA 171 Diplosphaera col...
ZP_03724939  98 TPFYAEARIFQY-EiGTP--IGETYVEGLGSSDf--------tALAEYW--DLIQGT-QVSKGVLTFSGMLDPDG--G-A 160 Diplosphaera col...
ZP_03726158 103 DPLYMEARIFQY-TvGET--IDLSYVENLNAEDf--------tKLAEYW--DLIQGT-QVSQGALTFTGQLDPDG----- 163 Diplosphaera col...
ZP_03725402  90 TQYYAATRVFQY-QpGTFfgVGYDGIEGFDVDVysv----slaDLASFW--TLIQGT-DVMQAEVAGYFTTSPSGlgTpV 161 Diplosphaera col...
ZP_03727594  95 TTYYAATRVFQY-SpGTL--IGDYDSEWPAAGDgirieslsleTLSSFW--TLIQGT-DVMQGEVTGYFVTPSDG--T-- 164 Diplosphaera col...
ZP_03723490 169 TAVTALYPALILSASA 184 Diplosphaera colitermitum TAV2
ZP_03725296 168 TGSTSTHQGSDLTWYT 183 Diplosphaera colitermitum TAV2
ZP_03725426 167 QDNQSTHTTSNLVWQT 182 Diplosphaera colitermitum TAV2
ZP_03724092 180 IGVNFPGAVLDQVVGA 195 Diplosphaera colitermitum TAV2
ZP_03726362 157 VSNGYDYVTNPPVMSG 172 Diplosphaera colitermitum TAV2
ZP_03725827 172 TGVVESFTTSSLTLGV 187 Diplosphaera colitermitum TAV2
ZP_03724939 161 TGV--TFGPAELQLSG 174 Diplosphaera colitermitum TAV2
ZP_03726158 164 LATNVTFGPAEYLLNG 179 Diplosphaera colitermitum TAV2
ZP_03725402 162 GGYPNATWPLTLTLSG 177 Diplosphaera colitermitum TAV2
ZP_03727594 165 NATPSINYAANMVLAG 180 Diplosphaera colitermitum TAV2
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap