FIGURE 50.3.. Sections of 2D 1H-13C 700 MHz NMR spectra of a sialyl Lewis x–capped glycan in D2O.

FIGURE 50.3.

Sections of 2D 1H-13C 700 MHz NMR spectra of a sialyl Lewis x–capped glycan in D2O. In this example, the combination of heteronuclear single quantum coherence (HSQC) and HSQC-total correlation spectroscopy (TOCSY) spectra is used to assign the chemical shift of each peak to an atom in the structure. Each residue in the structure is delineated by Roman numerals, and atom numbers in each residue are denoted using Arabic numerals. Assigning 1H-13C crosspeaks is accomplished by correlating data in the HSQC (top panel) and the HSQC-TOCSY (bottom three panels). The HSQC shows a peak for every 1H atom covalently bonded to a 13C atom. The HSQC-TOCSY shows crosspeaks for all 1Hs in a ring (also called a spin system) connected to a particular 1H-13C crosspeak. For example, the bottom panel shows connections for the anomeric pairs of I-Gal (4.38 1H ppm, 102.6 13C ppm) and II-GlcNAc (4.72 1H ppm, 102.51 13C ppm). Along each of the horizontal dotted lines are the 1H chemical shifts for the 1Hs in a ring, annotated as I4, I3, and I2 for I-Gal and II4, II2, and II3 for II-GlcNAc. The positions are characteristic of a residue type and linkage. Once the residue is identified the peaks in the HSQC can be assigned. The resulting assignments can be used in subsequent three-dimensional structure determination.

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From: Chapter 50, Structural Analysis of Glycans

Cover of Essentials of Glycobiology
Essentials of Glycobiology [Internet]. 4th edition.
Varki A, Cummings RD, Esko JD, et al., editors.
Cold Spring Harbor (NY): Cold Spring Harbor Laboratory Press; 2022.
Copyright © 2022 The Consortium of Glycobiology Editors, La Jolla, California; published by Cold Spring Harbor Laboratory Press; doi:10.1101/glycobiology.4e.50. All rights reserved.

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