© 2018 by Taylor & Francis Group, LLC.
Chapter 20.1 is included as a work of the U.S. Government and is in the public domain.
Bookshelf ID: NBK464188
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Handbook of Discrete and Combinatorial Mathematics, 2nd edition
Editors: Kenneth H. Rosen, Editor-in-chief, Douglas R. Shier, and Wayne Goddard.
Contents
- 20.1. Sequence AlignmentStephen F. Altschul and Mihai Pop.
- 20.1.1. GLOBAL AND LOCAL PAIRWISE ALIGNMENTS
- 20.1.2. PAIRWISE ALIGNMENT SCORES
- 20.1.3. PATH GRAPHS AND OPTIMAL GLOBAL PAIRWISE ALIGNMENT
- 20.1.4. OPTIMAL LOCAL PAIRWISE ALIGNMENT
- 20.1.5. SUBSTITUTION MATRICES
- 20.1.6. AFFINE GAP SCORES
- 20.1.7. SEQUENCE ALIGNMENT HEURISTICS
- 20.1.8. EXACT STRING MATCHING
- 20.1.9. INDEXING METHODS FOR STRING MATCHING
- REFERENCES
- NLM CatalogRelated NLM Catalog Entries
- Handbook of Discrete and Combinatorial MathematicsHandbook of Discrete and Combinatorial Mathematics
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