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Gilmore MS, Clewell DB, Ike Y, et al., editors. Enterococci: From Commensals to Leading Causes of Drug Resistant Infection [Internet]. Boston: Massachusetts Eye and Ear Infirmary; 2014-.
Replication initiator proteins in enterococci
|
Rep
family | Plasmid name | Plasmid GenBank Acc. nº | Bacterial Host | Rep name |
Rep initiator protein Genbank
Acc. Nº |
| Rep_trans (RCR) | pJS42 | NC_010291 | E. faecium | RepA | YP_001654986.1 |
| pRI1 | NC_010330.1 | E. faecium | Rep | YP_001672021.1 | |
| pRE25 | NC_008445 | E. faecalis | pRE25p11 | YP_783895.1 | |
| pEFNP1 | AB038522.1 | E. faecium | Orf1 | BAA92162.1 | |
| pRUM | NC_005000 | E. faecium | RepM | NP_863166.1 | |
| pTG9790 | NC_015845.1 | E. hirae | NicK | YP_004739228.1 | |
| pKQ10 | U01917.1 | E. faecium | Orf1 | AAB08924.1 | |
| Rep_2 (RCR) | pMV158 | X15669 | Streptococcus, Enterococcus | RepB | CAA33711.1 |
| pJB01 | NC_006427.1 | E. faecium | RepB | YP_138502.1 | |
| Rep_1 (RCR) | pNJAKD | NC_015849.1 | E. faecium | pNJAKD_p5 | YP_004747351.1 |
| pTEF1 | NC_004669 | E. faecalis V583 | Rep | NP_816941.1 | |
| pM7M2 | NC_016009.1 | E. faecium | Rep | YP_004849398.1 | |
| pAMα1 | NC_005013 | E. faecalis DS5 | RepB | NP_863351.1 | |
| RepA_N (θ) | pAD1 | L01794.1 | E. faecalis DS16 | RepA | AAB00503.1 |
| pTEF1 | NC_004669 | E. faecalis V583 | RepA-1 | NP_816932.1 | |
| EF62pC | CP002494.1 | E. faecalis 62 | PrgW | ADX81274.1 | |
| pBEE99 | NC_013533.1 | E. faecalis | PrgW | YP_003329050.1 | |
| pTEF2 | NC_004671 | E. faecalis V583 | RepA-2 | NP_817022.1 | |
| pMG2200 | NC_011642.1 | E. faecalis | RepA | YP_002333458.1 | |
| pTW9 | NC_014726.1 | E. faecalis | RepA | YP_004032946.1 | |
| EF62pB | CP002493.1 | E. faecalis 62 | PrgW | ADX81203.1 | |
| pEJ97-1 | AJ490170.1 | E. faecalis | RepA | CAD35304.1 | |
| pAM373 | NC_002630.1 | E. faecalis | pAM373_p02 | NP_071995.1 | |
| pCF10 | NC_006827 | E. faecalis | PrgW | YP_195765.1 | |
| pPD1 | D78016.1 | E. faecalis | RepA | BAA11194.1 | |
| pLG1 | HM565192.1 | E. faecium | RepA | ADO66907.1 | |
| pRUM | NC_005000 | E. faecium | pRUM_p29 | NP_863172.1 | |
| pS177 | NC_014959.1 | E. faecium | RepA | YP_004172632.1 | |
| p5753cB | GQ900487.1 | E. faecium | RepA | ADA62751.1 | |
| Inc18 (θ) | pIP501 | X17655.1 | Streptococcus, Enterococcus | RepR | CAA35647.1 |
| pTEF1 | NC_004669 | E. faecalis V583 | RepE | NP_816981.1 | |
| pIP816 | NC_011140.1 | E. faecium | RepE | YP_002128409.1 | |
| pAMβ1 | NC_013514.1 | E. faecalis DS5 | pAMbeta1_p03 | YP_003305348.1 | |
| pTW9 | NC_014726.1 | E. faecalis | RepE | YP_004032996.1 | |
| pRE25 | NC_008445 | E. faecalis | RepS | YP_783890.1 | |
| pWZ1668 | NC_014475.1 | E. faecalis | RepE | YP_003864107.1 | |
| pWZ909 | GQ484954.1 | E. faecalis | RepE | ADM24822.1 | |
| pWZ7140 | GQ484955.1 | E. faecalis | RepE | ADM24861.1 | |
| pVEF1 | NC_008768.1 | E. faecium | Rep | YP_976064.1 | |
| pVEF2 | NC_008821.1 | E. faecium | Rep | YP_001019023.1 | |
| pEF-01 | NC_014508.2 | E. faecalis | Rep | YP_003896005.1 | |
| pVEF4 | FN424376.1 | E. faecium | RepE | CAZ67085.1 | |
| pEH-1 | JN192453.1 | E. hirae | RepE | AEV23020.1 | |
| pEFM-1 | JN201336.1 | E. faecium | RepE | AEV23037.1 | |
| pVEF3 | NC_010980.1 | E. faecium | Rep | YP_001974773.1 | |
| pRE25 | NC_008445 | E. faecalis | Orf1 | Q9AL28 | |
| pVEF1 | NC_008768.1 | E. faecium | RepR | YP_976089.1 | |
| pVEF2 | NC_008821.1 | E. faecium | RepR | YP_001019046.1 | |
| pVEF3 | NC_010980.1 | E. faecium | RepR | YP_001974806.1 | |
| pIP816 | NC_011140.1 | E. faecium | RepR | YP_002128419.1 | |
| pLG2 | HQ426650.1 | E. faecalis | pLG2_0001 | AEF32542.1 | |
| pM7M2 | NC_016009.1 | E. faecium | RepR | YP_004849405.1 | |
| p5753cB | GQ900487.1 | E. faecium | Rep | ADA62715.1 | |
| pEF1 | NC_010880.1 | E. faecium | RepR | YP_001966128.1 | |
| pTEF3 | NC_004670.1 | E. faecalis V583 | RepS | NP_817021.1 | |
| pHTβ | NC_007594.1 | E. faecium | Rep | YP_398701.1 | |
| pZB18 | AB611033.1 | E. faecium | Rep | BAL40904.1 | |
| pMG1 | NC_011364.1 | E. faecium | Rep | YP_002274355.1 | |
| Rep_3 (θ) | pAMα1 | NC_005013 | E. faecalis DS5 | RepE | NP_863355.1 |
| pS86 | AJ223161 | E. faecalis | Rep | CAA11136.1 | |
| pEFC1 | D85392.1 | E. faecalis | Rep | BAA12801.1 | |
| p703/5 | AF109375.1 | E. faecalis | RepA | AAD16983.1 | |
| EF62pA | CP002492.1 | E. faecalis 62 | RepE | ADX81198.1 | |
| pEF-01 | NC_014508.2 | E. faecalis | RepB | YP_003896028.1 | |
| pCIZ2 | NC_008259 | E. faecium | Orf8 | YP_691718.1 | |
| pGL | HQ696461.1 | E. durans | Orf1 | ADW93773.1 | |
| pJS33 | NC_010290.1 | E. faecium | pJS33_01 | YP_001654983.1 | |
| pEF1071 | NC_005010 | E. faecalis | RepA | NP_863270.1 | |
| p200B | AB158402 | E. faecium | RepA | BAF44066.1 | |
| pEF47 | AY842500.1 | E. faecalis | RepE | AAX44237.1 | |
| pB82 | AB178871 | E. faecium | RepA | BAF36632.1 | |
| pHY | AB570326.1 | E. faecium | RepA | BAK74730.1 | |
| Plasmid | AY063485.1 | E. faecalis FAIR-E 309 | RepA | AAL39167.1 | |
| pEF418 | AF408195.1 | E. faecalis | RepA | AAL05545.1 | |
| pEFR | AF511037.1 | E. faecium | Rep | AAM44830.1 | |
| pMBB1 | U26268.1 | E. faecium | RepB | AAC44119.1 |
Neither replication initiators encoded in contigs derived from enterococcal genome sequencing projects, nor replication proteins from cloning vectors, are included.
From: Extrachromosomal and Mobile Elements in Enterococci: Transmission, Maintenance, and Epidemiology
This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. To view a copy of this license, visit https://creativecommons.org/licenses/by-nc-nd/4.0/
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