MIGS Cultured Bacterial/Archaeal sample from Porph... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

MIGS Cultured Bacterial/Archaeal sample from Porphyromonas uenonis 60-3

Identifiers: BioSample: SAMN00002220; Sample name: HMP093-454 Sample; SRA: SRS002424

Organism: Porphyromonas uenonis 60-3
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; Porphyromonas uenonis

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

environmental medium	biological product [ENVO:02000043]
host	Homo sapiens
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
environmental package	missing
isolation source	missing
project name	Porphyromonas uenonis 60-3
source material identifiers	BEI HM-130
investigation type	missing
reference for biomaterial	not determined
collection date	not determined
geographic location	not determined
latitude and longitude	not determined
isolation and growth condition	not determined
estimated size	2243000
strain	60-3
number of replicons	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
sequencing method	454
nucleic acid extraction	not determined
misc_param: HMP supersite	urogenital_tract
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type	Reference Genome
finishing strategy (depth of coverage)	Level 2: High-Quality Draft52x;250
assembly	not determined
misc_param: HMP body site	Vaginal

Description

Porphyromonas uenonis is an aerobic, gram-negative rod. It is a low virulence commensal member of the the human gut microbial flora. It is often found as part of a mixed flora in various infections which apparently originate from the intestinal tract. This strain was isolated from the human vaginal cavity.

Keywords: GSC:MIxS;MIGS:6.0