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BioSample

National Center for Biotechnology Information

Identifiers: BioSample: SAMN00002545; Sample name: BCM-HMP0079; SRA: SRS001908

Organism: Actinomyces urogenitalis DSM 15434
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces urogenitalis

Attributes

collection date	not determined
estimated size	2614000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Actinomyces urogenitalis DSM 15434
geographic location	not determined
source material identifiers	DSM 15434
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
environmental package	missing
strain	DSM 15434
culture collection	DSM:15434
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft35.81x;1230
project_type	Reference Genome
misc_param: HMP body site	Vaginal
nucleic acid extraction	not determined
assembly	Newbler v. 1.1.03.24
misc_param: HMP supersite	urogenital_tract
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX, Illumina
type-material	type strain of Actinomyces urogenitalis