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Sample 36

Identifiers
BioSample: SAMN16130572; Sample name: TB-36; SRA: SRS7423699
Organism
human sputum metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes
Package
Metagenome or environmental; version 1.0
Attributes
isolateNHLS_UP_MTb36
collected byTsireledzo Lithole
collection date2017
geographic locationSouth Africa:Pretoria (University of Pretoria)
isolation sourcesputum samples from TB patients; filtered and treated to remove non-Mycobacteria; MGIT culture for more than 21 days to amplify the Mycobacterium cells
latitude and longitude25.7332 S 28.2043 E
culture collectionNot collected
hostHomo sapiens
host diseaseTuberculosis
alternate-name-aliasUP_Mtb36
similar-toMycobacterium gordonae
BioProject
PRJNA663350 human sputum metagenome
Retrieve all samples from this project

Submission
Univeristy of Pretoria and National Health Laboratory Services, John Osei Sekyere; 2020-09-14
Antibiogram
AntibioticResistance phenotypeMeasurement signMeasurementMeasurement unitsLaboratory typing methodLaboratory typing platformVendorLaboratory typing method version or reagentTesting standard
pyrazinamideresistant>100mg/LMICCLSI
Antibiogram
AntibioticResistance phenotypeDST MediaDST MethodCritical ConcentrationTesting standard
pyrazinamideresistantliquidMGIT960100CLSI
Accession:
SAMN16130572
ID:
16130572

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