Sample 13 - BioSample - NCBI

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Sample 13

Identifiers: BioSample: SAMN16130549; Sample name: TB-13; SRA: SRS7423724

Organism: human sputum metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes

Package: Metagenome or environmental; version 1.0

Attributes

isolate	NHLS_UP_MTb13
collected by	Tsireledzo Lithole
collection date	2017
geographic location	South Africa:Pretoria (University of Pretoria)
isolation source	sputum samples from TB patients; filtered and treated to remove non-Mycobacteria; MGIT culture for more than 21 days to amplify the Mycobacterium cells
latitude and longitude	25.7332 S 28.2043 E
culture collection	Not collected
host	Homo sapiens
host disease	Tuberculosis
alternate-name-alias	UP_Mtb13
similar-to	Mycobacteroides abscessus

BioProject: PRJNA663350 human sputum metagenome
Retrieve all samples from this project

Submission: Univeristy of Pretoria and National Health Laboratory Services, John Osei Sekyere; 2020-09-14

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
pyrazinamide	resistant	>	100	mg/L	MIC				CLSI

Antibiogram
Antibiotic	Resistance phenotype	DST Media	DST Method	Critical Concentration	Testing standard
pyrazinamide	resistant	liquid	MGIT960	100	CLSI

Accession:: SAMN16130549
ID:: 16130549

BioProject SRA Nucleotide

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Sample 13
Sample 13

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txid2517771[orgn] AND "isolate NHLS UP MTb13"[All Fields] (1)
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