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BioSample

National Center for Biotechnology Information

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Uncultivated Verrucomicrobia bacterium UBA8032 genome recovered from SRX834653

Identifiers: BioSample: SAMN08019591; Sample name: UBA8032; SRA: SRS2845542

Organism: Verrucomicrobiota bacterium
cellular organisms; Bacteria; PVC group; Verrucomicrobiota; unclassified Verrucomicrobiota

Package: Microbe; version 1.0

Attributes

isolate	UBA8032
isolation source	gut
collection date	not applicable
geographic location	not applicable
sample type	metagenomic assembly
metagenome source	gut metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
genome_coverage	28.05x
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
completeness_estimated	73.97%
contamination_estimated	2.23%
environmental_sample	true
metagenomic	true
note	gut metagenome
value	This BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747052.

Description: Uncultivated genome recovered from an assembly of the SRX834653 metagenome.

BioProject: PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-11-13

Accession:: SAMN08019591
ID:: 8019591

BioProject SRA Nucleotide

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txid2026799[orgn] AND "isolate UBA8032"[All Fields] (1)
BioSample
Uncultivated Verrucomicrobia bacterium UBA8032 genome recovered from SRX834653
Uncultivated Verrucomicrobia bacterium UBA8032 genome recovered from SRX834653

biosample
MAG: Verrucomicrobiota bacterium isolate AFD bin30, whole genome shotgun sequenc...
MAG: Verrucomicrobiota bacterium isolate AFD bin30, whole genome shotgun sequencing project
gi|2564007722|gb|JALYLD000000000.1| D010000000

Nucleotide
MAG: Verrucomicrobiota bacterium isolate XB_MAG958, whole genome shotgun sequenc...
MAG: Verrucomicrobiota bacterium isolate XB_MAG958, whole genome shotgun sequencing project
gi|2662619506|gb|JAZANH000000000.1| H010000000

Nucleotide
txid2026799[orgn] AND "isolate MED-G86"[All Fields] (1)
BioSample

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