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Uncultivated Porphyromonadaceae bacterium UBA7062 genome recovered from SRX803752

Identifiers
BioSample: SAMN06452333; Sample name: Porphyromonadaceae bacterium UBA7062; SRA: SRS2036508
Organism
Porphyromonadaceae bacterium UBA7062
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA7062
isolation sourcerat gut
metagenome sourcerat gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX803752 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated74.79%
contamination_estimated0.31%
environmental_sampletrue
genome_coverage39.34
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702554.
Description

Uncultivated genome recovered from an assembly of the SRX803752 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452333
ID:
6452333

BioProject SRA Nucleotide

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