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Uncultivated Flavobacteriaceae bacterium UBA2000 genome recovered from SRX802143

Identifiers
BioSample: SAMN06454196; Sample name: Flavobacteriaceae bacterium UBA2000; SRA: SRS2036358
Organism
Flavobacteriaceae bacterium UBA2000
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; unclassified Flavobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNorth Sea
isolateUBA2000
isolation sourceSubsurface seawater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX802143 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated77.94%
contamination_estimated1.74%
environmental_sampletrue
genome_coverage10.55
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1699595.
Description

Uncultivated genome recovered from an assembly of the SRX802143 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454196
ID:
6454196

BioProject SRA Nucleotide

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