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Uncultivated Gammaproteobacteria bacterium UBA4443 genome recovered from SRX802077

Identifiers
BioSample: SAMN06454674; Sample name: Gammaproteobacteria bacterium UBA4443; SRA: SRS2036354
Organism
Gammaproteobacteria bacterium UBA4443
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNorth Sea
isolateUBA4443
isolation sourceSubsurface seawater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX802077 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.34%
contamination_estimated7.31%
environmental_sampletrue
genome_coverage22.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1699487.
Description

Uncultivated genome recovered from an assembly of the SRX802077 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454674
ID:
6454674

BioProject SRA Nucleotide

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