U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Deltaproteobacteria bacterium UBA5573 genome recovered from ERX386639

Identifiers
BioSample: SAMN06455623; Sample name: Deltaproteobacteria bacterium UBA5573; SRA: SRS2030603
Organism
Deltaproteobacteria bacterium UBA5573
cellular organisms; Bacteria; delta/epsilon subdivisions; Deltaproteobacteria; unclassified Deltaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationPacific Ocean
isolateUBA5573
isolation sourcehydrothermal vent
metagenome sourcehydrothermal vent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX386639 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated83.49%
contamination_estimated3.36%
environmental_sampletrue
genome_coverage12.87
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: ERR420346.
Description

Uncultivated genome recovered from an assembly of the ERX386639 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455623
ID:
6455623

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center