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Uncultivated Alphaproteobacteria bacterium UBA3307 genome recovered from SRX499297

Identifiers
BioSample: SAMN06452839; Sample name: Alphaproteobacteria bacterium UBA3307; SRA: SRS2034099
Organism
Alphaproteobacteria bacterium UBA3307
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3307
isolation sourcehigh methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX499297 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.91%
contamination_estimated1.53%
environmental_sampletrue
genome_coverage9.51
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1206671.
Description

Uncultivated genome recovered from an assembly of the SRX499297 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452839
ID:
6452839

BioProject SRA Nucleotide

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