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Uncultivated Firmicutes bacterium UBA5278 genome recovered from SRX691266

Identifiers
BioSample: SAMN06454756; Sample name: Firmicutes bacterium UBA5278; SRA: SRS2035681
Organism
Firmicutes bacterium UBA5278
cellular organisms; Bacteria; Bacillati; Bacillota; unclassified Bacillota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA5278
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691266 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated67.58%
contamination_estimated0.28%
environmental_sampletrue
genome_coverage8.88
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561991.
Description

Uncultivated genome recovered from an assembly of the SRX691266 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454756
ID:
6454756

BioProject SRA Nucleotide

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