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Uncultivated Ochrobactrum sp. UBA3110 genome recovered from SRX822508

Identifiers
BioSample: SAMN06452668; Sample name: Ochrobactrum sp. UBA3110; SRA: SRS2038959
Organism
Ochrobactrum sp. UBA3110
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Brucellaceae; Brucella/Ochrobactrum group; Ochrobactrum; unclassified Ochrobactrum
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3110
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822508 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.92%
contamination_estimated0.45%
environmental_sampletrue
genome_coverage12.53
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749125.
Description

Uncultivated genome recovered from an assembly of the SRX822508 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452668
ID:
6452668

BioProject SRA Nucleotide

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