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Uncultivated Nitrospira sp. UBA5702 genome recovered from SRX806416

Identifiers
BioSample: SAMN06451007; Sample name: Nitrospira sp. UBA5702; SRA: SRS2038462
Organism
Nitrospira sp. UBA5702
cellular organisms; Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; Nitrospira; unclassified Nitrospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSingapore
isolateUBA5702
isolation sourcesediments
metagenome sourcesediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX806416 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.09%
contamination_estimated3.86%
environmental_sampletrue
genome_coverage82.58
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the sediment metagenome reads: SRR1706179.
Description

Uncultivated genome recovered from an assembly of the SRX806416 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451007
ID:
6451007

BioProject SRA Nucleotide

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