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Metagenome or environmental sample from compost metagenome

Identifiers
BioSample: SAMN07501595; Sample name: week4; SRA: SRS2438503
Organism
compost metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Package
Metagenome or environmental; version 1.0
Attributes
isolation sourceCompost Sao Paulo University Recycling Project (Sao Carlos campus)
collection date2014-02-24
geographic locationBrazil: University of Sao Paulo, Sao Carlos campus
latitude and longitude22.0044 S 47.8963 W
sample collection device or methodComposting samples were collected from the S‹o Paulo University Recycling Project (S‹o Carlos campus) during the final mesophilic phase at locations 30 cm below the surface. A 1% (w/v) homogenized composting sample was used to inoculate minimal medium (MM). Cultures were supplemented with 3% (w/v) Sugarcane Bagasse (SCB) and incubated at 30 ¡C with 150 rpm agitation for up to five weeks. Prior to use, SCB was washed and dried at 50 ¡C. Weekly sampling was performed on three biological replicates. SCB and microbial biomass were separated from culture supernatant by centrifugation at 3,000 x g for 5 minutes at room temperature and used for nucleic acid extraction and biomass analysis.
timepointweek4
Description

Week 4 of composting microbial community growing with sugarcane bagasse as carbon source

BioProject
PRJNA398086
Retrieve all samples from this project

Submission
Universidade de Sao Paulo, Diego Riano-Pachon; 2017-08-11
Accession:
SAMN07501595
ID:
7501595

BioProject SRA

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