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Uncultivated Oxalobacteraceae bacterium UBA6704 genome recovered from SRX822108

Identifiers
BioSample: SAMN06454503; Sample name: Oxalobacteraceae bacterium UBA6704; SRA: SRS2038519
Organism
Oxalobacteraceae bacterium UBA6704
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; unclassified Oxalobacteraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6704
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822108 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.68%
contamination_estimated3.12%
environmental_sampletrue
genome_coverage12.73
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748686.
Description

Uncultivated genome recovered from an assembly of the SRX822108 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454503
ID:
6454503

BioProject SRA Nucleotide

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