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Uncultivated Helicobacter typhlonius UBA709 genome recovered from SRX1166928

Identifiers
BioSample: SAMN06453160; Sample name: Helicobacter typhlonius UBA709; SRA: SRS2032204
Organism
Helicobacter typhlonius
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Jiangsu province
isolateUBA709
isolation sourcemouse intestine 0group
metagenome sourcemouse gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1166928 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.67%
contamination_estimated5.53%
environmental_sampletrue
genome_coverage15.41
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the mouse gut metagenome reads: SRR2190826.
Description

Uncultivated genome recovered from an assembly of the SRX1166928 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453160
ID:
6453160

BioProject SRA Nucleotide

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