Bacteroides plebeius DSM 17135

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Identifiers: BioSample: SAMN00000028; Sample name: Bacteroides plebeius DSM 17135; SRA: SRS000028

Organism: Phocaeicola plebeius DSM 17135
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola plebeius

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	4421000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Bacteroides plebeius M12, DSM 17135
geographic location	not determined
source material identifiers	DSM 17135
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	DSM 17135
environmental package	missing
isolation source	missing
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft7.9x;30
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Newbler, PCAP
misc_param: HMP supersite	gastrointestinal_tract
sequencing method	454-GS20, Sanger
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
type-material	type strain of Bacteroides plebeius

Description

Bacteroides plebeius (GenBank Accession Number for 16S rDNA gene: AB200217) is a member of the Bacteroidetes division of the domain bacteria and has been isolated from human feces.

Keywords: GSC:MIxS;MIGS:6.0

Links: DNA Source

BioProjects: PRJNA266358 Vigna
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PRJNA27829 Phocaeicola plebeius DSM 17135
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