Uncultivated Methanosarcina sp. UBA7 genome recove... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Links from SRA

Uncultivated Methanosarcina sp. UBA7 genome recovered from DRX011532

Identifiers: BioSample: SAMN06027403; Sample name: Methanosarcina sp. UBA7; SRA: SRS1809384

Organism: Methanosarcina sp. UBA7
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; unclassified Methanosarcina

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	NULL
isolate	UBA7
isolation source	GM-anode biofilm
metagenome source	biofilm metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in DRX011532
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	88.99%
contamination_estimated	0.65%
environmental-sample	TRUE
genome_coverage	43.29
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	TRUE
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6

Description: Uncultivated genome recovered from an assembly of the DRX011532 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2016-11-16

Accession:: SAMN06027403
ID:: 6027403

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Uncultivated Methanosarcina sp. UBA7 genome recovered from DRX011532
Uncultivated Methanosarcina sp. UBA7 genome recovered from DRX011532

biosample
BioSample Links for SRA (Select 3444210) (1)
BioSample
Homo sapiens cDNA FLJ45105 fis, clone BRAWH3033117
Homo sapiens cDNA FLJ45105 fis, clone BRAWH3033117
gi|34533782|dbj|AK127048.1|

Nucleotide
PREDICTED: Homo sapiens ADP ribosylation factor like GTPase 10 (ARL10), transcri...
PREDICTED: Homo sapiens ADP ribosylation factor like GTPase 10 (ARL10), transcript variant X1, mRNA
gi|2217355591|ref|XM_011534529.4|

Nucleotide
D000083422 (1)
MeSH

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample