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Green roofs as biodiversity corridors in New York City; 1674.McG.F110714Ch2R3

Identifiers
BioSample: SAMEA4392107; SRA: ERS1303556
Organism
soil metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Attributes
altitude0
calcium5410
geographic locationGAZ:United States of America
depth0-0.0006
elevation5.72
broad-scale environmental contexturban biome
local-scale environmental contextgarden soil
environmental packagesoil
environmental mediumsoil
geographic locationUSA:NY,NY,Manhattan
host subject idMcG.F110714Ch2R3
magnesium408.472
potassium157.813
sample nameqiita_sid_1674:1674.McG.F110714Ch2R3
sample typesoil
ENA first public2016-08-21
ENA last update2016-08-20
ENA-CHECKLISTERC000011
External IdSAMEA4392107
INSDC center aliasUCSDMI
INSDC center nameUniversity of California San Diego Microbiome Initiative
INSDC first public2016-08-21T17:01:18Z
INSDC last update2016-08-20T07:28:03Z
INSDC statuspublic
Submitter Idqiita_sid_1674:1674.McG.F110714Ch2R3
anonymized nameMcG.F110714Ch2R3
assigned_from_geoTRUE
buroughManhattan
cityNew York City
collection_timestamp07/11/2012
common namesoil metagenome
diss_inorg_phosph449.844
dna_extractedTRUE
env mattersoil
extracted DNA avail nowTRUE
latitude40.748
longitude-74.001
micronutrient_methodICP
micronutrient_unitppm
percent_c4.48938
percent_n0.36703
physical_specimen_locationMcGuire Lab
physical_specimen_remainingTRUE
plant_communityRocky Summit
ppm_al87.343
ppm_as<0.1
ppm_b1.736
ppm_ba6.059
ppm_cd0.218
ppm_cr0.26
ppm_cu3.62
ppm_fe91.928
ppm_mn36.359
ppm_mo-<0.1
ppm_na88.734
ppm_ni1.052
ppm_pb4.347
ppm_zn92.758
publicTRUE
required_sample_info_statuscompleted
roof_park_nameChelsea
sample_progressSequenced (16S)
sampling typeFine Scale
Description

NYC green roofs soil in Manhattan

BioProject
PRJEB15216
Retrieve all samples from this project

Submission
EBI; 2016-08-22
Accession:
SAMEA4392107
ID:
5603340

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