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MIGS Cultured Bacterial/Archaeal sample from Streptococcus mitis SK575

Identifiers
BioSample: SAMN00761799; Sample name: HMPREF1048; SRA: SRS281638
Organism
Streptococcus mitis SK575
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mitis
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
collection datenot determined
estimated size2049000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
investigation typemissing
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameStreptococcus mitis SK575
geographic locationnot determined
source material identifiersCCUG 62644
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainSK575
environmental packagemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft297x;142
project_typeReference Genome
misc_param: HMP body siteBlood
nucleic acid extractionnot determined
assemblyCLC
misc_param: HMP supersiteother
sequencing methodIllumina HiSeq 2000
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Illumina Paired-Ends

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA75135 Streptococcus mitis SK575
Retrieve all samples from this project

Submission
JCVI; 2011-12-05
Accession:
SAMN00761799
ID:
761799

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