Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Links from Nucleotide

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Thompson

Identifiers: BioSample: SAMN03894081; Sample name: CVM N43472; SRA: SRS1102258

Organism: Salmonella enterica subsp. enterica serovar Thompson
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

geographic location	USA: NM
strain	CVM N43472
collection date	2013
isolation source	chicken breast
serovar	Thompson
collected by	FDA
latitude and longitude	missing
sub species	enterica
AssemblyVersion	CLC Genomics Workbench v. 6.0.2
SequencingTechnology	Illumina MiSeq

BioProjects: PRJNA292661 Salmonella enterica
Retrieve all samples from this project

PRJNA242614 Salmonella enterica
Retrieve all samples from this project

Submission: FDA, CVM FDA; 2015-07-22

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	<=	1/0.5	mg/L	MIC				CLSI
ampicillin	susceptible	<=	1	mg/L	MIC				CLSI
azithromycin	susceptible	==	4	mg/L	MIC				NARMS
cefoxitin	susceptible	==	2	mg/L	MIC				CLSI
ceftiofur	susceptible	==	0.5	mg/L	MIC				CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC				CLSI
chloramphenicol	susceptible	==	8	mg/L	MIC				CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC				CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC				CLSI
kanamycin	susceptible	<=	8	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	susceptible	<=	32	mg/L	MIC				NARMS
sulfisoxazole	susceptible	<=	16	mg/L	MIC				CLSI
tetracycline	susceptible	<=	4	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC				CLSI

Accession:: SAMN03894081
ID:: 3894081

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Thompson

biosample
BioSample links for Nucleotide (Select 919986278) (1)
BioSample
Taxonomy Links for Nucleotide (Select 1570433021) (1)
Taxonomy
Taxonomy Links for Nucleotide (Select 1725296756) (1)
Taxonomy
Taxonomy Links for Protein (Select 2192928960) (1)
Taxonomy

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample