MIGS Cultured Bacterial/Archaeal sample from Propi... - BioSample

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Result Filters

Organism: Cutibacterium acnes HL087PA3
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Cutibacterium; Cutibacterium acnes

Attributes

collection date	not determined
estimated size	not determined
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Propionibacterium acnes HL087PA3
geographic location	not determined
source material identifiers	BEI HM-542
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	HL087PA3
environmental package	missing
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft67.5x
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Velvet v. 0.7.57
misc_param: HMP supersite	skin
sequencing method	Illumina
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf

Description

Sample Type : genomic dna

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA49199 Cutibacterium acnes HL087PA3
Retrieve all samples from this project

MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL087PA3
MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL087PA3

biosample
BioSample links for Nucleotide (Select 422452685) (1)
BioSample
Protein Family Models for Protein (Select 2279156266) (1)
Protein Family Models
Cutibacterium acnes strain OGSA_07 NODE_2_length_627777_cov_39.349892, whole gen...
Cutibacterium acnes strain OGSA_07 NODE_2_length_627777_cov_39.349892, whole genome shotgun sequence
gi|2519353592|ref|NZ_JARJOP01000000 gnl|WGS:NZ_JARJOP01|NODE_2_length_627777_cov_39.349892

Nucleotide
Cutibacterium acnes strain OGSA_01 NODE_2_length_646800_cov_21.943965, whole gen...
Cutibacterium acnes strain OGSA_01 NODE_2_length_646800_cov_21.943965, whole genome shotgun sequence
gi|2519346833|ref|NZ_JARJOV01000000 gnl|WGS:NZ_JARJOV01|NODE_2_length_646800_cov_21.943965

Nucleotide