MIGS Cultured Bacterial/Archaeal sample from Neiss... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00761806; Sample name: HMPREF1051; SRA: SRS281645

Organism: Neisseria sicca VK64
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sicca

Attributes

collection date	not determined
estimated size	not determined
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Neisseria sicca VK64, NCTC 4591
geographic location	not determined
source material identifiers	NCTC 4591
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	VK64
environmental package	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft161.16x;210
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Celera Assembler v. 6.1
misc_param: HMP supersite	airways
sequencing method	not determined
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf

Description

Illumina Paired-Ends

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA75141 Neisseria sicca VK64
Retrieve all samples from this project

MIGS Cultured Bacterial/Archaeal sample from Neisseria sicca VK64
MIGS Cultured Bacterial/Archaeal sample from Neisseria sicca VK64

biosample
BioSample links for Nucleotide (Select 419799010) (1)
BioSample
Neisseria sicca VK64 ctg120005024723, whole genome shotgun sequence
Neisseria sicca VK64 ctg120005024723, whole genome shotgun sequence
gi|419798762|ref|NZ_AJMT01000196.1| WGS:NZ_AJMT01|ctg120005024723

Nucleotide
Neisseria sicca VK64 ctg120005024724, whole genome shotgun sequence
Neisseria sicca VK64 ctg120005024724, whole genome shotgun sequence
gi|419798948|ref|NZ_AJMT01000204.1| WGS:NZ_AJMT01|ctg120005024724

Nucleotide
Justicieae trnS-trnG intergenic spacer, partial sequence; chloroplast.
Justicieae trnS-trnG intergenic spacer, partial sequence; chloroplast.
PopSet: 1246707661

PopSet