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MIGS Cultured Bacterial/Archaeal sample from Yersinia pestis PY-100

Identifiers
BioSample: SAMN02141502; Sample name: MS100011610
Organism
Yersinia pestis PY-100
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
environmental packagemissing
investigation typebacteria_archaea
broad-scale environmental contextterrestrial biome [ENVO:00000446]
collection date2010
local-scale environmental contextanimal-associated habitat [ENVO:00006776]
latitude and longitudemissing
geographic locationPeru:Ascope, Chicama, La Libertad, AA.HH.
environmental mediumblood [ENVO:02000020]
project namePhylogenomics Of Yersinia Pestis - Plague Spread, Zoonotic Disease, And Forensics
hostNorway rat
host taxonomy ID10116 (10116)
isolation and growth conditionmissing
number of repliconsmissing
reference for biomaterialmissing
strainPY-100
finishing strategy (depth of coverage)159.79
sample size (ul)109
sequencing methodIllumina
assemblyVelvet 1.1.04
nucleic acid extractionmissing
Description

Keywords: GSC:MIxS;MIGS:6.0

Links
GSCID-Phylogenomics Of Yersinia Pestis
BioProject
PRJNA64389 Yersinia pestis PY-100
Retrieve all samples from this project

Submission
University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2013-05-08
Accession:
SAMN02141502
ID:
2141502

BioProject Nucleotide

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