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MIGS Cultured Bacterial/Archaeal sample from Yersinia pestis PY-88

Identifiers: BioSample: SAMN02141491; Sample name: MS100011599

Organism: Yersinia pestis PY-88
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

environmental package	missing
investigation type	bacteria_archaea
broad-scale environmental context	terrestrial biome [ENVO:00000446]
collection date	2010
local-scale environmental context	animal-associated habitat [ENVO:00006776]
latitude and longitude	missing
geographic location	Peru:Pacasmayo, Guadalupe, Mariscal Castilla
environmental medium	blood [ENVO:02000020]
project name	Phylogenomics Of Yersinia Pestis - Plague Spread, Zoonotic Disease, And Forensics
host	black rat
host taxonomy ID	10117 (10117)
isolation and growth condition	missing
number of replicons	missing
reference for biomaterial	missing
strain	PY-88
finishing strategy (depth of coverage)	122.99
sample size (ul)	98
sequencing method	Illumina
assembly	Velvet 1.1.04
nucleic acid extraction	missing

Description: Keywords: GSC:MIxS;MIGS:6.0

Links: GSCID-Phylogenomics Of Yersinia Pestis

BioProject: PRJNA64367 Yersinia pestis PY-88
Retrieve all samples from this project

Submission: University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2013-05-08

Accession:: SAMN02141491
ID:: 2141491

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MIGS Cultured Bacterial/Archaeal sample from Yersinia pestis PY-88
MIGS Cultured Bacterial/Archaeal sample from Yersinia pestis PY-88

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Mus musculus
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txid1311807[Organism:noexp] (29)
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