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MIGS Cultured Bacterial/Archaeal sample from Yersinia pestis PY-14

Identifiers
BioSample: SAMN02141461; Sample name: MS100011569
Organism
Yersinia pestis PY-14
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
environmental packagemissing
investigation typebacteria_archaea
broad-scale environmental contextterrestrial biome [ENVO:00000446]
collection date2009
local-scale environmental contextanimal-associated habitat [ENVO:00006776]
latitude and longitudemissing
geographic locationPeru:Ascope, Casa Grande, Toma Jauregui
environmental mediumblood [ENVO:02000020]
project namePhylogenomics Of Yersinia Pestis - Plague Spread, Zoonotic Disease, And Forensics
hostblack rat
host taxonomy ID10117 (10117)
isolation and growth conditionmissing
number of repliconsmissing
reference for biomaterialmissing
strainPY-14
finishing strategy (depth of coverage)113.06
sample size (ul)75
sequencing methodIllumina
assemblyVelvet 1.1.04
nucleic acid extractionmissing
Description

Keywords: GSC:MIxS;MIGS:6.0

Links
GSCID-Phylogenomics Of Yersinia Pestis
BioProject
PRJNA64307 Yersinia pestis PY-14
Retrieve all samples from this project

Submission
University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2013-05-08
Accession:
SAMN02141461
ID:
2141461

BioProject Nucleotide

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