MIGS Cultured Bacterial/Archaeal sample from Strep... - BioSample - NCBI

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MIGS Cultured Bacterial/Archaeal sample from Streptococcus oralis SK255

Identifiers: BioSample: SAMN00621703; Sample name: HMPREF9968; SRA: SRS210844

Organism: Streptococcus oralis SK255
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus oralis

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	2004000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Streptococcus oralis SK255
geographic location	not determined
source material identifiers	CCUG 27560
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	SK255
environmental package	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft11x;63
project_type	Reference Genome
misc_param: HMP body site	Blood
nucleic acid extraction	not determined
assembly	CA v6.1
misc_param: HMP supersite	other
sequencing method	454-GS-FLX-Titanium
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf

Description

454 Titanium 3kb

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA65581 Streptococcus oralis SK255
Retrieve all samples from this project

Submission: JCVI; 2011-05-26

Accession:: SAMN00621703
ID:: 621703

BioProject SRA Nucleotide

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MIGS Cultured Bacterial/Archaeal sample from Streptococcus oralis SK255
MIGS Cultured Bacterial/Archaeal sample from Streptococcus oralis SK255

biosample
BioSample links for Nucleotide (Select 334274743) (1)
BioSample
Homo sapiens dematin actin binding protein (DMTN), transcript variant 5, mRNA
Homo sapiens dematin actin binding protein (DMTN), transcript variant 5, mRNA
gi|166706882|ref|NM_001114138.1|

Nucleotide
Homo sapiens THO complex subunit 2 (THOC2), mRNA
Homo sapiens THO complex subunit 2 (THOC2), mRNA
gi|1519245609|ref|NM_001081550.2|

Nucleotide
lamina-associated polypeptide 2, isoform beta isoform 2 [Rattus norvegicus]
lamina-associated polypeptide 2, isoform beta isoform 2 [Rattus norvegicus]
gi|6981660|ref|NP_037019.1|

Protein

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