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Animal sample from Lepisosteus oculatus (spotted gar) for VGP reference genome, fLepOcu1

Identifiers
BioSample: SAMN41155427; Sample name: Animal sample from Lepisosteus oculatus (spotted gar) for VGP reference genome, fLepOcu1; SRA: SRS22034062
Organism
Lepisosteus oculatus (spotted gar)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Package
Model organism or animal; version 1.0
Attributes
isolatefLepOcu1
development stageadult
collection date2023-04-11
geographic locationUSA: Vacherie, Louisiana
sexmale
tissueblood, gills
biomaterial providerMichigan State University: Ingo Braasch
collected byIngo Braasch, Allyse Ferrara
latitude and longitude29.929889 N 90.747444 W
storage conditions-80oC
treatment100% Ethanol, LN2 flash freezing
Description

The spotted gar (Lepisosteus oculatus) is a freshwater fish native to North America. Its current range is from southern Ontario to the west from the Devils River in Texas east to the northern coast of the Gulf of Mexico and southeast to the lower Apalachicola River in Florida (from Wikipedia entry). This sample of a male individual found in Louisiana, United States was procured by Ingo Braasch and Allyse Ferrara to generate a high-quality reference genome data for the Vertebrate Genomes Project (VGP). Sequencing was conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1137080
Retrieve all samples from this project

PRJNA1106999 Lepisosteus oculatus isolate:fLepOcu1
Retrieve all samples from this project

PRJNA1106998 Lepisosteus oculatus isolate:fLepOcu1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-05-01
Accession:
SAMN41155427
ID:
41155427

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