| broad-scale environmental context | honeybee |
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| collection date | 2019-10-05 |
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| environmental medium | gut |
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| geographic location | China |
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| investigation type | metagenome-assembled genome |
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| isolation source | honeybee metagenome |
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| project name | metagenome of germ-free A. cerana and A. mellifera workers colonized with complete A. cerana or A. mellifera gut microbiota |
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| sample name | SRR10914165_bin.9_metawrap_v1.3.0_MAG |
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| ENA-CHECKLIST | ERC000047 |
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| ENA-FIRST-PUBLIC | 2022-08-24 |
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| ENA-LAST-UPDATE | 2022-08-24 |
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| External Id | SAMEA110697493 |
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| INSDC center alias | EMG |
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| INSDC center name | EMG |
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| INSDC first public | 2022-08-24T12:18:15Z |
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| INSDC last update | 2022-08-24T12:18:15Z |
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| INSDC status | public |
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| Submitter Id | SRR10914165_bin.9_metawrap_v1.3.0_MAG |
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| assembly quality | Many fragments with little to no review of assembly other than reporting of standard assembly statistics |
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| assembly software | metaSPAdes v3.15.3 |
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| binning parameters | MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters. |
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| binning software | metawrap v1.3.0 |
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| broker name | EMG broker account, EMBL-EBI |
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| completeness score | 100 |
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| completeness software | CheckM |
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| contamination score | 0.0 |
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| geographic location (latitude) | 30.15 |
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| geographic location (longitude) | 120.1 |
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| local environmental context | digestive system |
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| metagenomic source | honeybee metagenome |
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| sample derived from | SAMN13742480 |
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| sequencing method | Illumina NovaSeq 6000 |
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| taxonomic classification | The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Apibacter;s__Apibacter mensalis |
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| taxonomic identity marker | multi-marker approach |
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