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Uncultivated Paracoccus sp. UBA5162 genome recovered from ERX555992

Identifiers
BioSample: SAMN06456302; Sample name: Paracoccus sp. UBA5162; SRA: SRS2031311
Organism
Paracoccus sp. UBA5162
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paracoccus; unclassified Paracoccus (in: a-proteobacteria)
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA5162
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555992 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.17%
contamination_estimated0.76%
environmental_sampletrue
genome_coverage43.51
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599112.
Description

Uncultivated genome recovered from an assembly of the ERX555992 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456302
ID:
6456302

BioProject SRA Nucleotide

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