Uncultivated Pseudomonas sp. UBA2311 genome recove... - BioSample - NCBI

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Uncultivated Pseudomonas sp. UBA2311 genome recovered from SRX822628

Identifiers: BioSample: SAMN06457732; Sample name: Pseudomonas sp. UBA2311; SRA: SRS2039064

Organism: Pseudomonas sp. UBA2311
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; unclassified Pseudomonas

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA2311
isolation source	metal
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822628 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	93.56%
contamination_estimated	1.50%
environmental_sample	true
genome_coverage	59.87
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749245.

Description: Uncultivated genome recovered from an assembly of the SRX822628 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06457732
ID:: 6457732

BioProject SRA Nucleotide

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Uncultivated Pseudomonas sp. UBA2311 genome recovered from SRX822628
Uncultivated Pseudomonas sp. UBA2311 genome recovered from SRX822628

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