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Methanosarcina mazei mutant (Mm Mut 208) Genome assembly

Identifiers
BioSample: SAMN32970220; Sample name: Methanosarcina mazei mutant (Mm Mut 208) Genome assembly
Organism
Methanosarcina mazei
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
Package
Microbe; version 1.0
Attributes
strainMm Mut 208
collection date2020-08-13
geographic locationGermany:Kiel
sample typeisolate
isolation sourcemissing
subsource noteliposome-mediated transformation; contains overexpression plasmid pRS1270
Description

Methanosarcina mazei Go1 wild type was transformed with a Cas1solo (MM_RS16885) overexpression plasmid. A single positive colony was isolated, named Methanosarcina mazei mutant 208 (Mm Mut 208), and used as an empty vector control during a long-term evolution experiment. As a reference for possible chromosomal mutations or rearrangements during the long-term experiment, strain Mm Mut 208 was sequenced using Illumina and Oxford Nanopore Sequencing and assembled using hybrid assembly. This Biosample represents the genome assembly based on a pipeline including longQC, unicycler and polypolish.

BioProject
PRJNA929891 Methanosarcina mazei strain:Mm Mut 208 | isolate:Mm Mut 208
Retrieve all samples from this project

Submission
Christian-Albrechts-University Kiel, Finn Gehlert; 2023-01-31
Accession:
SAMN32970220
ID:
32970220

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