MIGS Cultured Bacterial/Archaeal sample from Clost... - BioSample - NCBI

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MIGS Cultured Bacterial/Archaeal sample from Clostridium methylpentosum DSM 5476

Identifiers: BioSample: SAMN00008812; Sample name: 46685; SRA: SRS010433

Organism: [Clostridium] methylpentosum DSM 5476
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Oscillospiraceae incertae sedis; [Clostridium] methylpentosum

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	3406000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Clostridium methylpentosum R2, DSM 5476
geographic location	not determined
source material identifiers	DSM 5476, ATCC 43829
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	DSM 5476
environmental package	missing
culture collection	DSM:5476
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft22.2x;146
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Newbler v. 2.0.00.20
misc_param: HMP supersite	gastrointestinal_tract
sequencing method	454-GS-FLX
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf

Description

Clostridium methylpentosum R2

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA30029 [Clostridium] methylpentosum DSM 5476
Retrieve all samples from this project

Submission: WUGSC; 2010-02-19

Accession:: SAMN00008812
ID:: 8812

BioProject SRA Nucleotide

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MIGS Cultured Bacterial/Archaeal sample from Clostridium methylpentosum DSM 5476
MIGS Cultured Bacterial/Archaeal sample from Clostridium methylpentosum DSM 5476

biosample
BioSample links for Nucleotide (Select 222527959) (1)
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BioSample
NIPSNAP3A nipsnap homolog 3A [Homo sapiens]
NIPSNAP3A nipsnap homolog 3A [Homo sapiens]
Gene ID:25934

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Gene Links for Nucleotide (Select 1519245587) (1)
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Clostridium methylpentosum DSM 5476 - ATCC 43829 [BacDive]
Clostridium methylpentosum DSM 5476 - ATCC 43829
BacDive

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