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Pseudomonas aeruginosa isolate E167

Identifiers
BioSample: SAMN26565253; Sample name: EPIC E167
Organism
Pseudomonas aeruginosa
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strainE167
collected byEPIC Observational Study NCT00676169
collection date2010
geographic locationUSA
hostHomo sapiens
host diseaseCystic fibrosis
isolation sourceoropharynx, sputum, or bronchoalveolar lavage
latitude and longitude37.0902 N 95.7129 W
aliasEPIC isolate E167
Description

The clinic isolate Pseudomonas E167 uses RhlR to regulate quorum sensing, unlike other studied strains which use LasR (LasR is nonfunctional in E167). We sequenced and assembled a genome of E167 and performed an RNA-seq transcriptomics study to determine the RhlR-regulated quorum sensing regulon of E167.

BioProject
PRJNA814703 Pseudomonas aeruginosa strain:E167 | isolate:EPIC E167
Retrieve all samples from this project

Submission
University of Washington, Kyle Asfahl; 2022-03-10
Accession:
SAMN26565253
ID:
26565253

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