CDC Sars CoV2 Sequencing Baseline Constellation

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN23613076; SRA: SRS12810508; CDC-OAMD: SARS-CoV-2/Human/USA/FL-CDC-STM-PVT44N75C/2021

Organism: Severe acute respiratory syndrome coronavirus 2
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus

Attributes

isolate	SARS-CoV-2/Human/USA/FL-CDC-STM-PVT44N75C/2021
collected by	'Helix'
collection date	2021-11-17
isolation source	nasal swab
geographic location	USA: Florida
host	Homo sapiens
host disease	COVID-19
host sex	female
host age	56
collection device	Nasal swab
collection method	Nasal swab
purpose of sequencing	baseline surveillance (random sampling)
host_race	White
diagnostic_gene_name_1	N
diagnostic_pcr_protocol_1	Helix COVID-19 and Flu Test
diagnostic_pcr_Ct_value_1	Unknown
diagnostic_gene_name_2	ORF1ab
diagnostic_pcr_protocol_2	Helix COVID-19 and Flu Test
diagnostic_pcr_Ct_value_2	Unknown
diagnostic_gene_name_3	S
diagnostic_pcr_protocol_3	Helix COVID-19 and Flu Test
diagnostic_pcr_Ct_value_3	Unknown
lineage/clade name	AY.25