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Microbe sample from Hyphomicrobiales bacterium

Identifiers
BioSample: SAMN09638452; Sample name: Uncultivated Rhizobiales bacterium HyVt-271 genome recovered from DRR093004; SRA: SRS3740224
Organism
Hyphomicrobiales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; unclassified Hyphomicrobiales
Package
Microbe; version 1.0
Attributes
isolateHyVt-271
isolation sourcemarine hydrothermal vent chimney sediment
collection date2010-06-16
geographic locationPacific Ocean:Southern Mariana Trough
sample typemetagenomic assembly
latitude and longitude12.93 N 143.62 E
subsource noteMetagenome-assembled genome binned from sequencing reads available in DRR093004
metagenome sourcemarine metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated54.5
contamination_estimated2.24
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage7.89
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638452
ID:
9638452

BioProject SRA Nucleotide

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